DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and ca4b

DIOPT Version :9

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001159683.1 Gene:ca4b / 553246 ZFINID:ZDB-GENE-080815-5 Length:304 Species:Danio rerio


Alignment Length:309 Identity:94/309 - (30%)
Similarity:150/309 - (48%) Gaps:35/309 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IVIAPILICASLVLAQDFGYE-----GRH---GPEHWSEDYARCSGKHQSPINI-DQVSAVEKKF 66
            :.::.:.|...|..:.::.|:     ..|   ||:.|:...|.|....|||||| ...::.:.:.
Zfish     4 LCLSTLAILCRLASSAEWCYQTQVTCSNHSCIGPDDWATVAAACGNNKQSPINIVTNKASTDSRL 68

  Fly    67 PKLEFFNFKVVPDNLQMTNNGHTVLVKMSYNEDEIPSVRGGPLAEKTPLGYQFEQFHFHWGENDT 131
            ..::|.::: ...|..:.||||||.:    |..:...:.|..|...    |:.:|.|.|||:|..
Zfish    69 TPVQFTDYQ-ERLNAVIVNNGHTVQI----NLPDRAKINGANLGST----YKAQQLHLHWGKNGG 124

  Fly   132 IGSEDLINNRAYPAELHVVLRNLEYPDFASALDKDHGIAVMAFFFQVGDKSTGGYEGFTNLLSQI 196
            .|||..|:...:|.|||||....||.....|:....|:||:.||::..:.:...|:...|.|:.|
Zfish   125 PGSEHTIDGEKFPMELHVVHIKEEYNSLEQAVGDSSGVAVLGFFYEESENANKNYDAIINSLTNI 189

  Fly   197 DRKGK-------SVNMTNPLPLGEYISKSVESYFSYTGSLTTPPCSEEVTWIDFTTPIDITEKQL 254
            .....       |::|..|       ::.::.||.|.||||||.|:|.|.|..|...|.::::||
Zfish   190 THPESNAELGAISLDMLIP-------NEDLDKYFRYEGSLTTPGCAEAVVWTIFEKTIPLSKEQL 247

  Fly   255 NAFRLLTANDD-HLKNNFRPIQPLNDRTLYKNYIEIPIHNMGSIPLVDA 302
            :||..||.:|. .:.|.|||||...||.:|  |....|.::.:|.||.:
Zfish   248 SAFSNLTFSDGAAMVNTFRPIQLRFDRPVY--YSRSYIFHVSTILLVSS 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 28..281 CDD:215000 85/269 (32%)
ca4bNP_001159683.1 alpha_CA_IV_XV_like 50..278 CDD:239391 80/245 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3338
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100138
Panther 1 1.100 - - O PTHR18952
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.820

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