DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and Ca3

DIOPT Version :10

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_062165.2 Gene:Ca3 / 54232 RGDID:2241 Length:260 Species:Rattus norvegicus


Alignment Length:271 Identity:88/271 - (32%)
Similarity:138/271 - (50%) Gaps:20/271 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LAQDFGYEGRHGPEHWSEDYARCSGKHQSPINIDQVSAVEKKFPKLEFFNFKVVPDNLQ-MTNNG 87
            :|:::||...:|||||.|.|....|.:||||.:.....  :..|.|:.::....|.:.: :.|||
  Rat     1 MAKEWGYASHNGPEHWHELYPIAKGDNQSPIELHTKDI--RHDPSLQPWSVSYDPGSAKTILNNG 63

  Fly    88 HTVLVKMSYNEDEIPSVRGGPLAEKTPLGYQFEQFHFHWGENDTIGSEDLINNRAYPAELHVVLR 152
            .|..|......|. ..:|||||:..    |:..|||.|||.:|..|||..::...|.||||:|..
  Rat    64 KTCRVVFDDTFDR-SMLRGGPLSGP----YRLRQFHLHWGSSDDHGSEHTVDGVKYAAELHLVHW 123

  Fly   153 NLEYPDFASALDKDHGIAVMAFFFQVGDKSTGGYEGFTNLLSQIDRKGKSV--NMTNPLPLGEYI 215
            |.:|..|..||.:..||||:..|.::| :..|.::...:.|.:|..|||..  |..:|    ..:
  Rat   124 NPKYNTFGEALKQPDGIAVVGIFLKIG-REKGEFQILLDALDKIKTKGKEAPFNHFDP----SCL 183

  Fly   216 SKSVESYFSYTGSLTTPPCSEEVTWIDFTTPIDITEKQLNAFRLLTANDDH-----LKNNFRPIQ 275
            ..:...|::|.||.|||||.|.:.|:....|:.::..|:...|.|.|:.::     |..|:||.|
  Rat   184 FPACRDYWTYHGSFTTPPCEECIVWLLLKEPMTVSSDQMAKLRSLFASAENEPPVPLVGNWRPPQ 248

  Fly   276 PLNDRTLYKNY 286
            |:..|.:..::
  Rat   249 PIKGRVVRASF 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 34..286 CDD:459707 85/259 (33%)
Ca3NP_062165.2 alpha_CA_I_II_III_XIII 1..259 CDD:239393 88/269 (33%)
Involved in proton transfer. /evidence=ECO:0000250|UniProtKB:P07451 64..67 1/2 (50%)

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