DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and Car1

DIOPT Version :9

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001077426.1 Gene:Car1 / 12346 MGIID:88268 Length:261 Species:Mus musculus


Alignment Length:269 Identity:86/269 - (31%)
Similarity:138/269 - (51%) Gaps:21/269 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DFGYEGRHGPEHWSEDYARCSGKHQSPINIDQVSAVEKKFPKLEFFNFKVVPDNL-QMTNNGHT- 89
            |:||...:||:.||:.|...:|.:||||:|....|....  .|:..:....|... ::.|.||: 
Mouse     5 DWGYGSENGPDQWSKLYPIANGNNQSPIDIKTSEANHDS--SLKPLSISYNPATAKEIVNVGHSF 67

  Fly    90 -VLVKMSYNEDEIPSVRGGPLAEKTPLGYQFEQFHFHWGENDTIGSEDLINNRAYPAELHVVLRN 153
             |:...|.|:..:   :|||||:    .|:..|||||||.::..|||..::...|..|||:|..|
Mouse    68 HVIFDDSSNQSVL---KGGPLAD----SYRLTQFHFHWGNSNDHGSEHTVDGTRYSGELHLVHWN 125

  Fly   154 -LEYPDFASALDKDHGIAVMAFFFQVGDKSTGGYEGFTNLLSQIDRKGKSVNMTNPLPLGEYISK 217
             .:|...:.|:.|..|:|::....:|| .:....:...:.|:.:..|||....||..| ...:..
Mouse   126 SAKYSSASEAISKADGLAILGVLMKVG-PANPSLQKVLDALNSVKTKGKRAPFTNFDP-SSLLPS 188

  Fly   218 SVESYFSYTGSLTTPPCSEEVTWIDFTTPIDITEKQLNAFR-LLTANDDH----LKNNFRPIQPL 277
            |:: |::|.||||.||..|.|||:.....|.::.:||...| ||::.:..    :.:|.||.|||
Mouse   189 SLD-YWTYFGSLTHPPLHESVTWVICKDSISLSPEQLAQLRGLLSSAEGEPAVPVLSNHRPPQPL 252

  Fly   278 NDRTLYKNY 286
            ..||:..::
Mouse   253 KGRTVRASF 261

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 28..281 CDD:215000 83/261 (32%)
Car1NP_001077426.1 alpha_CA 2..261 CDD:381753 86/267 (32%)