DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and ca4.2

DIOPT Version :9

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:XP_002933882.2 Gene:ca4.2 / 100489625 XenbaseID:XB-GENE-5952677 Length:302 Species:Xenopus tropicalis


Alignment Length:314 Identity:99/314 - (31%)
Similarity:149/314 - (47%) Gaps:42/314 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRRCRNTPFAIVIAPILICASLVLAQDFGYE--GRH----GPEHWSEDYARCSGKHQSPINIDQV 59
            |.:|.:  .|::::..||..|.....|:.||  |..    ||..|.|.|..|:..||||||:...
 Frog     1 MMKCFS--LALLVSLSLIKDSAAAEGDWCYEIQGHQTLGCGPRFWGEHYPTCAKNHQSPINVLTK 63

  Fly    60 SAV-EKKFPKLEFFNFKVVPDNLQMTNNGHTVLVKMSYNEDEIPS---VRGGPLAEKTPLGYQFE 120
            .|| :|......|..:.:...:|.:|||||:..|       ::|:   :.||.|:|.    |...
 Frog    64 KAVFDKALKPFHFKGYNITGRHLNITNNGHSAQV-------DLPTGIEISGGGLSET----YIAA 117

  Fly   121 QFHFHWGENDTIGSEDLINNRAYPAELHVV-LRNLEYPDFASALDKDHGIAVMAFFFQVGDKSTG 184
            |||||||.::..|||..::...||.|||:| .|......|..       :||:.||::...|:..
 Frog   118 QFHFHWGSDEFYGSEHTVDGEKYPMELHIVHKRKTSTGGFGD-------LAVLGFFYEETAKNNT 175

  Fly   185 GYEGFTNLLSQIDR----KGKSVNMTNPLPLGEYISKSVESYFSYTGSLTTPPCSEEVTWIDFTT 245
            .|......|..|..    |..|..:...:|:.|     ::.|:.|.||||||||:|.|.|..|.|
 Frog   176 EYNSLIESLGHISTKDGYKNFSATLDKLIPINE-----LKVYYRYNGSLTTPPCNETVIWTLFNT 235

  Fly   246 PIDITEKQLNAFR--LLTANDDHLKNNFRPIQPLNDRTLYKNYIEIPIHNMGSI 297
            .|.:::.||.||.  |.......:..||||:|..:||.:|.:..::.:.:..|:
 Frog   236 TIKLSKLQLQAFHNSLNFTEKQRMVENFRPVQKRSDRIVYTSSSQVILSSFQSL 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 28..281 CDD:215000 89/269 (33%)
ca4.2XP_002933882.2 alpha_CA_IV_XV_like 52..275 CDD:239391 81/245 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1377476at2759
OrthoFinder 1 1.000 - - FOG0000047
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR18952
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X57
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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