DRSC/TRiP Functional Genomics Resources

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Protein Alignment CAH2 and ptprz1

DIOPT Version :10

Sequence 1:NP_648555.1 Gene:CAH2 / 39390 FlyBaseID:FBgn0027843 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001362251.1 Gene:ptprz1 / 100125091 XenbaseID:XB-GENE-1011831 Length:2281 Species:Xenopus tropicalis


Alignment Length:329 Identity:97/329 - (29%)
Similarity:149/329 - (45%) Gaps:39/329 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 DFGYEGRHGPEHWSEDYARCSGKHQSPINIDQ-VSAVEKKFPKLEFFNFKVVPDNLQM-TNNGHT 89
            |:.|......|:|.:.|..|:|..|||||||: ::.:.....||.|..:......|.: .|.|.|
 Frog    37 DWSYTETLNQENWVKKYPVCNGAKQSPINIDEDLTQLNTNLKKLHFEGWDKESSELTLIRNTGKT 101

  Fly    90 VLVKMSYNEDEIPSVRGGPLAEKTPLGYQFEQFHFHWGE-NDTI-GSEDLINNRAYPAELHVVLR 152
            |.:.::  :|...|  ||.|..:    |:..:..||||: |.|. |||..:..:.:|.|:.:...
 Frog   102 VEINLT--DDYYLS--GGALDSQ----YKASRITFHWGKCNATSDGSEHSLEGQKFPLEMQIFCF 158

  Fly   153 N-LEYPDFASALDKDHGIAVMAFFFQVGDKSTGGYEGFTNLLSQIDRKGKSVNMTNPLPLGEYIS 216
            | .|:.:...|:..:..|..::..|:||.:....|....:.:..:.|.|..|.: .|..|...:.
 Frog   159 NHNEFKNIDEAISGNGKIKALSILFKVGQEDNVHYNEIIDGVDNVHRFGTKVAL-GPFILSNLLP 222

  Fly   217 KSVESYFSYTGSLTTPPCSEEVTWIDFTTPIDITEKQLNAF-RLLTAND-------DHLKNNFRP 273
            ...:.|::|.||||||||||.|.||.|...:.|:|.||..| .:||...       |:|:||:|.
 Frog   223 DYTDKYYTYNGSLTTPPCSETVEWIVFKDTVTISESQLEMFCEILTMQQSGYVMVMDYLQNNYRH 287

  Fly   274 IQPLNDRTLYKNYI---EIPIHNMGSIP---LVDAENAAG---KWRAQAAAVLLPLVVL-AALSR 328
            .|......::.:|.   |||.....|.|   ..|::|...   .||.       |.||. |.:.|
 Frog   288 QQYKFSGQVFSSYTGTEEIPEPVCSSEPEDVRADSKNNTSLLITWRR-------PRVVYDAVIER 345

  Fly   329 TSIF 332
            ..:|
 Frog   346 YLVF 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CAH2NP_648555.1 Carb_anhydrase 34..286 CDD:459707 79/264 (30%)
ptprz1NP_001362251.1 alpha_CARP_receptor_like 45..298 CDD:239396 79/261 (30%)
fn3 313..401 CDD:394996 12/44 (27%)
PTP_DSP_cys 1690..1960 CDD:475123
R-PTP-Z-2 2043..2246 CDD:350507
Blue background indicates that the domain is not in the aligned region.

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