DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and LTB4R2

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001158164.1 Gene:LTB4R2 / 56413 HGNCID:19260 Length:358 Species:Homo sapiens


Alignment Length:376 Identity:96/376 - (25%)
Similarity:153/376 - (40%) Gaps:80/376 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 FEPPKSST-------------FLIMAALYCLISVVGCVGNAFVIFMFANRKSLR-TP-ANILVMN 157
            :.||.:.|             ||::|||      :|..||.||::..|..:..| .| |..||::
Human     5 YRPPGNETLLSWKTSRATGTAFLLLAAL------LGLPGNGFVVWSLAGWRPARGRPLAATLVLH 63

  Fly   158 LAICDFLMLIKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHP-L 221
            ||:.|..:|:..|:.:....::...||...|:...:|..||...::.....::|.|...|..| |
Human    64 LALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRCLAVTRPFL 128

  Fly   222 QPLRRCSRLRS----YLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIF 282
            .|     ||||    ..::|.:|..:.|.|| ||     :||........|...: ...:.|...
Human   129 AP-----RLRSPALARRLLLAVWLAALLLAV-PA-----AVYRHLWRDRVCQLCH-PSPVHAAAH 181

  Fly   283 MALFFVAAYCIPLTSIVYSYFYILKVVFTASRIQSNK-DKAKTEQKLAFIVAAIIGLWFLAWSPY 346
            ::|..:.|:.:|...::..|      ..|.:|::..: ...:...::..:|:||:..:.|.|:||
Human   182 LSLETLTAFVLPFGLMLGCY------SVTLARLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPY 240

  Fly   347 -AIVAMMGVFGL---ERHITPLGSMIPALFCKTAA------CVDPYLYAAT--------HPRFRV 393
             |:..:..|..|   |..:..||....|....|.|      .|:|.||..|        .|||  
Human   241 HAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPRAGPRF-- 303

  Fly   394 EVRMLFYGRGVLRRVSTTRSSYMTRSRSSFTHRLRTS----TTGEG-GMGD 439
             :..||.|.|..|....:|..         |..|||:    ..|:| |.||
Human   304 -LTRLFEGSGEARGGGRSREG---------TMELRTTPQLKVVGQGRGNGD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 35/128 (27%)
7tm_1 133..384 CDD:278431 66/268 (25%)
LTB4R2NP_001158164.1 7tm_GPCRs 21..300 CDD:355774 75/302 (25%)
TM helix 1 23..47 CDD:341315 10/29 (34%)
TM helix 2 58..79 CDD:341315 7/20 (35%)
TM helix 3 95..117 CDD:341315 3/21 (14%)
TM helix 4 140..156 CDD:341315 5/16 (31%)
TM helix 5 179..202 CDD:341315 4/28 (14%)
TM helix 6 220..245 CDD:341315 8/24 (33%)
TM helix 7 267..292 CDD:341315 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..358 12/43 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165140667
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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