DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and LTB4R2

DIOPT Version :10

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_062813.2 Gene:LTB4R2 / 56413 HGNCID:19260 Length:358 Species:Homo sapiens


Alignment Length:376 Identity:96/376 - (25%)
Similarity:153/376 - (40%) Gaps:80/376 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 FEPPKSST-------------FLIMAALYCLISVVGCVGNAFVIFMFANRKSLR-TP-ANILVMN 157
            :.||.:.|             ||::|||      :|..||.||::..|..:..| .| |..||::
Human     5 YRPPGNETLLSWKTSRATGTAFLLLAAL------LGLPGNGFVVWSLAGWRPARGRPLAATLVLH 63

  Fly   158 LAICDFLMLIKCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHP-L 221
            ||:.|..:|:..|:.:....::...||...|:...:|..||...::.....::|.|...|..| |
Human    64 LALADGAVLLLTPLFVAFLTRQAWPLGQAGCKAVYYVCALSMYASVLLTGLLSLQRCLAVTRPFL 128

  Fly   222 QPLRRCSRLRS----YLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIF 282
            .|     ||||    ..::|.:|..:.|.|| ||     :||........|...: ...:.|...
Human   129 AP-----RLRSPALARRLLLAVWLAALLLAV-PA-----AVYRHLWRDRVCQLCH-PSPVHAAAH 181

  Fly   283 MALFFVAAYCIPLTSIVYSYFYILKVVFTASRIQSNK-DKAKTEQKLAFIVAAIIGLWFLAWSPY 346
            ::|..:.|:.:|...::..|      ..|.:|::..: ...:...::..:|:||:..:.|.|:||
Human   182 LSLETLTAFVLPFGLMLGCY------SVTLARLRGARWGSGRHGARVGRLVSAIVLAFGLLWAPY 240

  Fly   347 -AIVAMMGVFGL---ERHITPLGSMIPALFCKTAA------CVDPYLYAAT--------HPRFRV 393
             |:..:..|..|   |..:..||....|....|.|      .|:|.||..|        .|||  
Human   241 HAVNLLQAVAALAPPEGALAKLGGAGQAARAGTTALAFFSSSVNPVLYVFTAGDLLPRAGPRF-- 303

  Fly   394 EVRMLFYGRGVLRRVSTTRSSYMTRSRSSFTHRLRTS----TTGEG-GMGD 439
             :..||.|.|..|....:|..         |..|||:    ..|:| |.||
Human   304 -LTRLFEGSGEARGGGRSREG---------TMELRTTPQLKVVGQGRGNGD 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_GPCRs 118..395 CDD:475119 76/302 (25%)
TM helix 1 119..143 CDD:320207 8/23 (35%)
TM helix 2 152..173 CDD:320207 7/20 (35%)
TM helix 3 189..211 CDD:320207 3/21 (14%)
TM helix 4 234..250 CDD:320207 5/15 (33%)
TM helix 5 280..303 CDD:320207 3/22 (14%)
TM helix 6 329..351 CDD:320207 8/22 (36%)
TM helix 7 363..388 CDD:320207 10/38 (26%)
LTB4R2NP_062813.2 7tm_GPCRs 21..300 CDD:475119 75/302 (25%)
TM helix 1 23..47 CDD:410628 10/29 (34%)
TM helix 2 58..79 CDD:410628 7/20 (35%)
TM helix 3 95..117 CDD:410628 3/21 (14%)
TM helix 4 140..156 CDD:410628 5/16 (31%)
TM helix 5 179..202 CDD:410628 4/28 (14%)
TM helix 6 223..245 CDD:410628 8/21 (38%)
TM helix 7 267..292 CDD:410628 7/24 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..358 12/43 (28%)

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