DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and LOC558520

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_686842.2 Gene:LOC558520 / 558520 -ID:- Length:346 Species:Danio rerio


Alignment Length:325 Identity:77/325 - (23%)
Similarity:144/325 - (44%) Gaps:37/325 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 IMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNIKEGP- 181
            |...:|.::..||.:.|:.||:..|:.|. :..::|.|:||||.|.|.|:..|..|:..:::.. 
Zfish    39 IFPTIYGVLCSVGVLANSLVIYAVASCKK-KMVSDIYVLNLAIADLLFLLVMPFNIHQLVRDRQW 102

  Fly   182 ALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLF 246
            ..|...|:....|...:....:|.:|.:.:|||..:|||....|...  .:.:|.:::|..||| 
Zfish   103 VFGHFMCKAVVVVDVSNQFTTVGIVTVLCIDRYIAIVHPTSEKRTIQ--WTIIINIMVWVGSFL- 164

  Fly   247 AVMPALDIGLSVY---VPEGFLTTCSFDYLNKEMPARIFMALFF--VAAYCIPLTSIVYSYFYIL 306
                 |.|.:.:|   ..:..:..|..|...   |..::....:  :..:.|||  |:...||.|
Zfish   165 -----LSIPVMIYAKVTSKKSMDICMIDLGG---PQDMYWYTLYQSMLGFMIPL--IIICTFYTL 219

  Fly   307 KVVFTASRIQSNKDKAKTEQKLAF-IVAAIIGLWFLAWSPYAIVAMMGVFGLERHITPLGSMIPA 370
            .:......|:..|.|.....|.|. .|..:|.|:.:.||||.::.|:.:  ..:|  |..:.:.|
Zfish   220 TLYHVFRSIRRVKRKQSVWAKRATKTVLMVIALFLVCWSPYHVIQMINL--SIQH--PTSAFVYA 280

  Fly   371 L---FC--KTAACVDPYLYAATHPRFRVEVRMLFYGRGVLRRVSTTRSSYMTRSRSSF----THR 426
            .   .|  .:.:|::|.:.......:|   ..|.:.:.:..::|:::::..|...||.    :||
Zfish   281 YNISICLSYSHSCINPLMLLLFAQNYR---DRLCHRKELRSQISSSKTTVKTDGGSSVSPDTSHR 342

  Fly   427  426
            Zfish   343  342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 35/122 (29%)
7tm_1 133..384 CDD:278431 65/262 (25%)
LOC558520XP_686842.2 7tm_1 55..297 CDD:278431 64/259 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573354
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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