DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and Sstr2

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_062221.1 Gene:Sstr2 / 54305 RGDID:3763 Length:369 Species:Rattus norvegicus


Alignment Length:418 Identity:100/418 - (23%)
Similarity:174/418 - (41%) Gaps:89/418 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 STGLSNYSNYPSYIHYRDKYDLSYIAKVNPFWLQFEPPKSSTF-LIMAALYCLISVVGCVGNAFV 137
            |.|.||.||                        |.||....|. .::..:|.::.|||..||..|
  Rat    24 SLGPSNGSN------------------------QTEPYYDMTSNAVLTFIYFVVCVVGLCGNTLV 64

  Fly   138 IFMFANRKSLRTPANILVMNLAICDFLMLIKCP-IAIYNNIKEGPALGDIACRLYGFVGGLSGTC 201
            |::......::|..||.::||||.|.|.::..| :|:...:...| .|...||:...|.|::...
  Rat    65 IYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWP-FGKAICRVVMTVDGINQFT 128

  Fly   202 AIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLT 266
            :|..||.:::|||..||||::..:......:.:|.:.:|..| |..::|.: |...:...:...:
  Rat   129 SIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMINVAVWGVS-LLVILPIM-IYAGLRSNQWGRS 191

  Fly   267 TCSFDYLNKEMPARI------FMALFFVAAYCIPLTSIVYSY-FYILKVVFTASRIQSNKDKAKT 324
            :|:.::     |...      |:...|:..:.:|||.|...| |.|:||..:..|:.|:|.| |:
  Rat   192 SCTINW-----PGESGAWYTGFIIYAFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRK-KS 250

  Fly   325 EQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLERHITP---LGSMIPALFCKTAA--CVDPYLY 384
            |:|:..:|:.::.::...|.|:.|   ..|..:...|:|   |..|...:...|.|  |.:|.||
  Rat   251 EKKVTRMVSIVVAVFIFCWLPFYI---FNVSSVSVAISPTPALKGMFDFVVILTYANSCANPILY 312

  Fly   385 AATHPRFRVEVRMLFYGRGVLRRVSTTRSSYMTRSRSSFTHRL---RTSTTGEGGMGDHRMENYL 446
            |.....|                            :.||.:.|   :.|...:|...|.:.:...
  Rat   313 AFLSDNF----------------------------KKSFQNVLCLVKVSGAEDGERSDSKQDKSR 349

  Fly   447 MNNNLMMVPEETEENEEIVVVAEINNSI 474
            :|        ||.|.:..::..::..||
  Rat   350 LN--------ETTETQRTLLNGDLQTSI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 38/122 (31%)
7tm_1 133..384 CDD:278431 70/263 (27%)
Sstr2NP_062221.1 7tm_4 54..327 CDD:304433 79/312 (25%)
7tm_1 60..312 CDD:278431 70/263 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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