DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rh7 and sstr5

DIOPT Version :10

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_073794518.1 Gene:sstr5 / 406588 ZFINID:ZDB-GENE-040426-2502 Length:389 Species:Danio rerio


Alignment Length:318 Identity:76/318 - (23%)
Similarity:148/318 - (46%) Gaps:26/318 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 MAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNIKEGPAL 183
            :|.:|.::.:||..||:..||:......::|..|:.::|||:.|.|.::..|....:|:......
Zfish    37 LAVIYLVVFIVGLTGNSLAIFVVLRYTKMKTVTNMYILNLAVADELYILGLPFLTTHNVLSYWPF 101

  Fly   184 GDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLFAV 248
            |:..||:..:...:|...:...||.:::|||..||||::..|......:.:|..::|..|.|   
Zfish   102 GNFLCRILMWADSISQFTSTFCLTVMSIDRYMAVVHPIRSARWRRPSVAKVINSMVWALSCL--- 163

  Fly   249 MPALDIGLSVY--VPEGFLTTCSFDYLN-KEMPARIFMALFFVAAYCIPLTSIVYSYFYILKVVF 310
               |.:.:.:|  |..| |.||:..:.. :::.:..|:....:..:..||..|...|..|:..|.
Zfish   164 ---LTLPVIIYCDVQPG-LNTCNLSWPEPRDVWSTAFILYTAILGFFCPLLVICLCYLLIVIKVK 224

  Fly   311 TASRIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLERHIT-PLGSMIPALFCK 374
            :||.......:.|:|:|:..:|..|:.::.:.|.|:   .|:.:|.|.  :| |..::|..::..
Zfish   225 SASARAGLSKRRKSEKKVTRMVVIIVVVFVICWLPF---FMLNIFNLV--VTLPENNIITGVYFL 284

  Fly   375 TA------ACVDPYLYAATHPRFRVEVRMLFYGRGVLRRVSTTRSSYMTRSRSSFTHR 426
            |.      :|.:|.||......|:...:.:.    .:.||:.....:..|:|.|..|:
Zfish   285 TVILTYVNSCANPLLYGFLSDNFKRSFQKVL----CIHRVNGVSDEHPNRARISRNHQ 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_GPCRs 118..395 CDD:475119 70/285 (25%)
TM helix 1 119..143 CDD:320207 8/23 (35%)
TM helix 2 152..173 CDD:320207 7/20 (35%)
TM helix 3 189..211 CDD:320207 4/21 (19%)
TM helix 4 234..250 CDD:320207 4/15 (27%)
TM helix 5 280..303 CDD:320207 4/22 (18%)
TM helix 6 329..351 CDD:320207 4/21 (19%)
TM helix 7 363..388 CDD:320207 7/30 (23%)
sstr5XP_073794518.1 None

Return to query results.
Submit another query.