DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and opn4.1

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_840074.2 Gene:opn4.1 / 352918 ZFINID:ZDB-GENE-030314-2 Length:500 Species:Danio rerio


Alignment Length:419 Identity:124/419 - (29%)
Similarity:210/419 - (50%) Gaps:54/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 HSHSTGSTTSTAGSSATESSAVNVGKDHDKHVNDSVSTGLSNYS------NYPSYIHYRDKYDLS 96
            |..:.|....|||...                    |.|..||.      :.|::.|:.|     
Zfish    10 HHCAPGDINCTAGFKE--------------------SLGSRNYKLLHVPVHGPTHSHHHD----- 49

  Fly    97 YIAKVNPFWLQFEPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAIC 161
               ..:|| ...:.|..:.::| .::..::.:.|.:|||.|:::|...::|||..|:.::|||:.
Zfish    50 ---PPHPF-PTVDVPDHAHYII-GSVILIVGITGVIGNALVVYVFCRSRTLRTAGNMFIVNLAVA 109

  Fly   162 DFLMLI-KCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLR 225
            ||||.: :.|:....::......|:..|.||.|.|.|.|.|::.||||||.||...:..||..:.
Zfish   110 DFLMSVTQSPVFFAASLHRRWVFGERPCELYAFCGALFGICSMMTLTAIAADRCLAITQPLALVS 174

  Fly   226 RCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMALFFVAA 290
            |.||.::..:::::|.||..:::.|.  .|.|.|||||..|:||:||:......|.:..|.||..
Zfish   175 RVSRRKAGAVLVVVWLYSLGWSLPPF--FGWSAYVPEGLQTSCSWDYMTFTPSVRAYTILLFVFV 237

  Fly   291 YCIPLTSIVYSYFYILKVVFTASRI-------QSNK--DKAKTEQKLAFIVAAIIGLWFLAWSPY 346
            :.|||..|...||.|.:.:..|.:.       :::|  ::.:.|.|:|.:...:|.|:.::||||
Zfish   238 FFIPLGIIGSCYFAIFQTIRAAGKEIRELDCGETHKVYERMQNEWKMAKVALVVIVLFIISWSPY 302

  Fly   347 AIVAMMGVFGLERHITPLGSMIPALFCKTAACVDPYLYAATHPRFRVEV-RMLFYGRGVLR-RVS 409
            ::||:....|....:||..:.:||:..|.:|..:|.:||.|||::||.: |.:...|.:|| :..
Zfish   303 SVVALTATAGYSHFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRVAIARYIPVLRPILRVKEK 367

  Fly   410 TTRSSYMTRSRSSFTHRLRTSTTGEGGMG 438
            ..|||:.:.|.||    .|.:.|.:..:|
Zfish   368 DLRSSFSSGSVSS----RRPTLTSQCSLG 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 43/122 (35%)
7tm_1 133..384 CDD:278431 87/260 (33%)
opn4.1NP_840074.2 7tm_4 72..>284 CDD:304433 70/213 (33%)
7tm_1 81..340 CDD:278431 87/260 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 404..428
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D389088at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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