DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rh7 and Opn4

DIOPT Version :10

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_038915.1 Gene:Opn4 / 30044 MGIID:1353425 Length:521 Species:Mus musculus


Alignment Length:339 Identity:110/339 - (32%)
Similarity:184/339 - (54%) Gaps:22/339 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 WLQF---EPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLML 166
            |:.|   :.|..:.: .:..:..|:.:.|.:||..||:.|...:.||||||:.::|||:.||||.
Mouse    56 WVPFPTVDVPDHAHY-TLGTVILLVGLTGMLGNLTVIYTFCRNRGLRTPANMFIINLAVSDFLMS 119

  Fly   167 I-KCPIAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRL 230
            : :.|:...:::.:....|:..|..|.|.|.:.|..::.||||||:|||.|:..||..:.|.|:.
Mouse   120 VTQAPVFFASSLYKKWLFGETGCEFYAFCGAVFGITSMITLTAIAMDRYLVITRPLATIGRGSKR 184

  Fly   231 RSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMALFFVAAYCIPL 295
            |:.|::|.:|.|:..:::.|.  .|.|.|||||.||:||:||:......|.:..|.|...:.:||
Mouse   185 RTALVLLGVWLYALAWSLPPF--FGWSAYVPEGLLTSCSWDYMTFTPQVRAYTMLLFCFVFFLPL 247

  Fly   296 TSIVYSYFYILKVVFTASRI-----------QSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYAIV 349
            ..|::.|.:|.:.:....|.           :....:.::|.|:|.:...:|.|:.|:|:||:.|
Mouse   248 LIIIFCYIFIFRAIRETGRACEGCGESPLRQRRQWQRLQSEWKMAKVALIVILLFVLSWAPYSTV 312

  Fly   350 AMMGVFGLERHITPLGSMIPALFCKTAACVDPYLYAATHPRFRVEVRMLFYGRGVLRRVSTTRS- 413
            |::...|....:||..|.:||:..|.:|..:|.:||.|||::||.:.......|||..||..|| 
Mouse   313 ALVAFAGYSHILTPYMSSVPAVIAKASAIHNPIIYAITHPKYRVAIAQHLPCLGVLLGVSGQRSH 377

  Fly   414 ---SYMTRSRSSFT 424
               ||.:..||:.:
Mouse   378 PSLSYRSTHRSTLS 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_GPCRs 118..395 CDD:475119 96/288 (33%)
TM helix 1 119..143 CDD:320207 7/23 (30%)
TM helix 2 152..173 CDD:320207 9/21 (43%)
TM helix 3 189..211 CDD:320207 9/21 (43%)
TM helix 4 234..250 CDD:320207 4/15 (27%)
TM helix 5 280..303 CDD:320207 6/22 (27%)
TM helix 6 329..351 CDD:320207 8/21 (38%)
TM helix 7 363..388 CDD:320207 9/24 (38%)
Opn4NP_038915.1 7tm_GPCRs 70..358 CDD:475119 96/290 (33%)
TM helix 1 72..96 CDD:410628 7/23 (30%)
TM helix 2 105..127 CDD:410628 9/21 (43%)
TM helix 3 143..165 CDD:410628 9/21 (43%)
TM helix 4 188..204 CDD:410628 4/15 (27%)
TM helix 5 232..255 CDD:410628 6/22 (27%)
TM helix 6 292..314 CDD:410628 8/21 (38%)
TM helix 7 326..351 CDD:410628 9/24 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..486
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.