DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and Sstr4

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_033245.2 Gene:Sstr4 / 20608 MGIID:105372 Length:385 Species:Mus musculus


Alignment Length:319 Identity:77/319 - (24%)
Similarity:149/319 - (46%) Gaps:35/319 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 DLSYIAKVNPFWLQFEPPK---------SSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRT 149
            |.::...:|..|...|..:         ::..:.:..:|.|:.:||.||||.|||:......::|
Mouse    13 DTTWTPGINASWAPDEEEEDAMGSDGTGTAGMVTIQCIYALVCLVGLVGNALVIFVILRYAKMKT 77

  Fly   150 PANILVMNLAICDFLMLIKCP-IAIYNNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDR 213
            ..||.::|||:.|.|.::..| :|....::..| .|.:.||....|.||:...::..||.:::||
Mouse    78 ATNIYLLNLAVADELFMLSVPFVASAAALRHWP-FGAVLCRAVLSVDGLNMFTSVFCLTVLSVDR 141

  Fly   214 YNVVVHPLQ--PLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPE-----GFLTTCSFD 271
            |..|||||:  ..||.|..:  ||.|.:|..|.|      :.:.::|:...     |....|:..
Mouse   142 YVAVVHPLRAATYRRPSVAK--LINLGVWLASLL------VTLPIAVFADTRPARGGEAVACNLH 198

  Fly   272 YLNKEMPARIFMALFFVAAYCIPLTSIVYSYFYILKVVFTASRIQSNKDKAKTEQKLAFIVAAII 336
            :.:....| :|:...|:..:.:|:.:|...|..|:..:...:.....:.:.::|:|:..:|..::
Mouse   199 WPHPAWSA-VFVIYTFLLGFLLPVLAIGLCYLLIVGKMRAVALRAGWQQRRRSEKKITRLVLMVV 262

  Fly   337 GLWFLAWSPYAIVAMMGVFGLERHITPLGSM---IPALFCKTAACVDPYLYAATHPRFR 392
            .::.|.|.|:.:|.::.:|     :|.|.:.   :..:.....:|.:|.||......||
Mouse   263 TVFVLCWMPFYVVQLLNLF-----VTSLDATVNHVSLILSYANSCANPILYGFLSDNFR 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 46/124 (37%)
7tm_1 133..384 CDD:278431 64/261 (25%)
Sstr4NP_033245.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 4/23 (17%)
7tmA_SSTR4 45..319 CDD:320639 73/287 (25%)
TM helix 1 46..72 CDD:320639 11/25 (44%)
TM helix 2 79..105 CDD:320639 9/25 (36%)
TM helix 3 116..146 CDD:320639 10/29 (34%)
TM helix 4 158..180 CDD:320639 7/29 (24%)
TM helix 5 205..234 CDD:320639 7/29 (24%)
TM helix 6 249..279 CDD:320639 7/29 (24%)
TM helix 7 287..312 CDD:320639 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830633
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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