DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rh7 and Sstr3

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001343890.1 Gene:Sstr3 / 20607 MGIID:98329 Length:428 Species:Mus musculus


Alignment Length:374 Identity:90/374 - (24%)
Similarity:163/374 - (43%) Gaps:84/374 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCP-IAIYNNIKEG 180
            ::::.:|.::.|||.:||:.||::.....|..:..::.::|||:.|.|.::..| :|..|.:...
Mouse    46 ILISLVYLVVCVVGLLGNSLVIYVVLRHTSSPSVTSVYILNLALADELFMLGLPFLAAQNALSYW 110

  Fly   181 PALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFL 245
            | .|.:.|||...|.|::...:|..||.:::|||..||||.:..|..:...:..:...:|..|.:
Mouse   111 P-FGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARTVSAAVWVASAV 174

  Fly   246 FAVMPALDIGLSVY--VPEGFLTTCSFDYLNKEMPARIFMALFFVAAYCI----PLTSIVYSYFY 304
             .|:|.:     |:  ||.| ::||   ::....||..:...|.:....:    ||..|...|..
Mouse   175 -VVLPVV-----VFSGVPRG-MSTC---HMQWPEPAAAWRTAFIIYTAALGFFGPLLVICLCYLL 229

  Fly   305 I-LKVVFTASRIQSN----------KDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLE 358
            | :||..|..|:::.          :.:.::|:::..:|.|::.|:.|.|.|:.::.::.|    
Mouse   230 IVVKVRSTTRRVRAPSCQWVQAPACQRRRRSERRVTRMVVAVVALFVLCWMPFYLLNIVNV---- 290

  Fly   359 RHITPLGSMIPALF---------CKTAACVDPYLYAATHPRFRVEVRMLFYGRGVLRRVSTTRSS 414
              :.||... ||.|         ....:|.:|.||.....||:...|.      :|.|.|     
Mouse   291 --VCPLPEE-PAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRR------ILLRPS----- 341

  Fly   415 YMTRSRSSFTHRLRTSTTGEGGMGDHRMENYLMNNNLMMVPEETEENEE 463
                      .|:|:...|.|                  .||:|||.|:
Mouse   342 ----------RRIRSQEPGSG------------------PPEKTEEEED 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 36/122 (30%)
7tm_1 133..384 CDD:278431 68/277 (25%)
Sstr3NP_001343890.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
7tm_GPCRs 46..333 CDD:391938 76/304 (25%)
TM helix 1 48..72 CDD:341315 8/23 (35%)
TM helix 2 81..102 CDD:341315 6/20 (30%)
TM helix 3 118..140 CDD:341315 7/21 (33%)
TM helix 4 163..179 CDD:341315 3/16 (19%)
TM helix 5 205..228 CDD:341315 4/22 (18%)
TM helix 6 262..287 CDD:341315 6/24 (25%)
TM helix 7 301..326 CDD:341315 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..428 9/37 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167830631
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.