DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and Sstr2

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001036071.1 Gene:Sstr2 / 20606 MGIID:98328 Length:369 Species:Mus musculus


Alignment Length:418 Identity:102/418 - (24%)
Similarity:176/418 - (42%) Gaps:89/418 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 STGLSNYSNYPSYIHYRDKYDLSYIAKVNPFWLQFEPPKSSTF-LIMAALYCLISVVGCVGNAFV 137
            |.|.||.||                        |.||....|. .::..:|.::.|||..||..|
Mouse    24 SLGPSNGSN------------------------QTEPYYDMTSNAVLTFIYFVVCVVGLCGNTLV 64

  Fly   138 IFMFANRKSLRTPANILVMNLAICDFLMLIKCP-IAIYNNIKEGPALGDIACRLYGFVGGLSGTC 201
            |::......::|..||.::||||.|.|.::..| :|:...:...| .|...||:...|.|::...
Mouse    65 IYVILRYAKMKTITNIYILNLAIADELFMLGLPFLAMQVALVHWP-FGKAICRVVMTVDGINQFT 128

  Fly   202 AIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLFAVMPALDIGLSVYVPEGFLT 266
            :|..||.:::|||..||||::..:......:.:|.:.:||.| |..::|.: |...:...:...:
Mouse   129 SIFCLTVMSIDRYLAVVHPIKSAKWRRPRTAKMINVAVWCVS-LLVILPIM-IYAGLRSNQWGRS 191

  Fly   267 TCSFDYLNKEMPARI------FMALFFVAAYCIPLTSIVYSY-FYILKVVFTASRIQSNKDKAKT 324
            :|:.::     |...      |:...|:..:.:|||.|...| |.|:||..:..|:.|:|.| |:
Mouse   192 SCTINW-----PGESGAWYTGFIIYAFILGFLVPLTIICLCYLFIIIKVKSSGIRVGSSKRK-KS 250

  Fly   325 EQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLERHITP---LGSMIPALFCKTAA--CVDPYLY 384
            |:|:..:|:.::.::...|.|:.|   ..|..:...|:|   |..|...:...|.|  |.:|.||
Mouse   251 EKKVTRMVSIVVAVFIFCWLPFYI---FNVSSVSVAISPTPALKGMFDFVVILTYANSCANPILY 312

  Fly   385 AATHPRFRVEVRMLFYGRGVLRRVSTTRSSYMTRSRSSFTHRL---RTSTTGEGGMGDHRMENYL 446
            |.....|                            :.||.:.|   :.|.|.:|...|.:.:...
Mouse   313 AFLSDNF----------------------------KKSFQNVLCLVKVSGTEDGERSDSKQDKSR 349

  Fly   447 MNNNLMMVPEETEENEEIVVVAEINNSI 474
            :|        ||.|.:..::..::..||
Mouse   350 LN--------ETTETQRTLLNGDLQTSI 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 39/122 (32%)
7tm_1 133..384 CDD:278431 71/263 (27%)
Sstr2NP_001036071.1 7tmA_SSTR2 44..323 CDD:320637 79/318 (25%)
TM helix 1 45..71 CDD:320637 8/25 (32%)
TM helix 2 78..104 CDD:320637 10/25 (40%)
TM helix 3 115..145 CDD:320637 10/29 (34%)
TM helix 4 157..179 CDD:320637 6/23 (26%)
TM helix 5 205..234 CDD:320637 9/28 (32%)
TM helix 6 249..279 CDD:320637 8/32 (25%)
TM helix 7 291..316 CDD:320637 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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