DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and npr-24

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_510833.3 Gene:npr-24 / 187897 WormBaseID:WBGene00020086 Length:373 Species:Caenorhabditis elegans


Alignment Length:327 Identity:80/327 - (24%)
Similarity:145/327 - (44%) Gaps:49/327 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 EPPKSSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAI 173
            :|.|:...|    .:||.:::|...|.||:......:.:||.:||.:.|||:.|.|.|...|:::
 Worm    15 DPIKTVAHL----TWCLTALIGIPANLFVLAAIVYFRDMRTISNIYIFNLAVADLLFLCGIPVSL 75

  Fly   174 Y-NNIKEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLR-RCSR------L 230
            : .:..:|...|.|.|:||.....:|...:...:..::.|||..|..|:|... |.::      :
 Worm    76 FAQSSHDGWIWGPIMCKLYISGNAVSQFASAVFIAILSFDRYLAVCRPIQSKSFRTTQAAFALSV 140

  Fly   231 RSYLIILLIWCYSFLFAVM-------------PALDIGLSVYVPEGFLTTCSFDYLN---KEMPA 279
            .::::::|.....|||..:             ..|.:| :|.|.|. .|..:...||   :.|.|
 Worm   141 AAWIMVILEMTPLFLFVKLIKSSSAGEARGGSCMLFVG-NVTVLES-ATEMNETLLNEIEQNMLA 203

  Fly   280 --RIFMALFFVAAYCIPLTSIVYSYF-YILKVVFTASRIQSNKDKAKTE-QKLAFIVAAIIGLWF 340
              |.|::..|..:|.|||.::.|.|| .|||:.....::|:.:...|.. .|:..:..||:..:.
 Worm   204 SRRFFISYTFALSYLIPLVAVWYFYFKIILKMCQRKRQMQTKRTATKKRTTKVTIMGLAIVISYT 268

  Fly   341 LAWSPYAIVAMMGVFGLERHITPLGSMIPALFCKT---------AACVDPYLYAATHPRFRVEVR 396
            ..|.|:.||.    :.:|.::......:  |||.|         .:..:|:||......|:..::
 Worm   269 HCWLPFWIVQ----WSIEANLFEKSKYL--LFCCTHFAFALQYINSAANPFLYVFLSDSFQKNIQ 327

  Fly   397 ML 398
            .|
 Worm   328 KL 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 33/129 (26%)
7tm_1 133..384 CDD:278431 70/287 (24%)
npr-24NP_510833.3 7tm_GPCRs 25..326 CDD:391938 76/308 (25%)
TM helix 1 25..46 CDD:341315 6/20 (30%)
TM helix 2 53..80 CDD:341315 9/26 (35%)
TM helix 3 91..121 CDD:341315 7/29 (24%)
TM helix 4 133..155 CDD:341315 1/21 (5%)
TM helix 5 185..234 CDD:341315 16/49 (33%)
TM helix 6 251..281 CDD:341315 7/33 (21%)
TM helix 7 293..319 CDD:341315 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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