DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and H09F14.1

DIOPT Version :10

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_001256232.1 Gene:H09F14.1 / 186709 WormBaseID:WBGene00010375 Length:401 Species:Caenorhabditis elegans


Alignment Length:320 Identity:62/320 - (19%)
Similarity:117/320 - (36%) Gaps:78/320 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 FLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNIKEG 180
            |.:...|..||.:.|..||...:....:.:..|..|||.::.|.:.|.:.|....:..:.     
 Worm     8 FDVYMYLLPLIVIFGLSGNVISLVTIFHSRLRRVNANIYLIVLTLADSIFLTGILLICFK----- 67

  Fly   181 PALGDIACRLYGFVGGL------SGTCAIGTLTAIALDRYNVVVHPLQPLR--RCSRLRSYLIIL 237
                 :....|.:..||      :...:..:..|:.::||..:.|||..::  ...|.:    ::
 Worm    68 -----VDWIAYEYCVGLEYVLMTASYISSWSTAALTIERYLAIAHPLSHMKYGHVDRAK----VM 123

  Fly   238 LIW--------CYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMALFFVAAYCIP 294
            |.|        .:.| |::.||.:           ...|:....|.::   |..|:..|..|.:|
 Worm   124 LYWVPIPFVLQLFQF-FSLEPATE-----------ERKCALKEANYQI---IAQAVDTVLCYVVP 173

  Fly   295 LTSIVYSYFYILKVVFTASRIQSNKDKAKTEQKLAFI-----VAAIIGLWF-LAW---------- 343
            ...||     :|.:: .|.::|.:::....|.|.:..     .::..|.|. :.|          
 Worm   174 CGIIV-----VLNIL-VALQVQKSQEHFMAETKKSNSRRTGGSSSSSGTWTRILWVMPLVFVVLN 232

  Fly   344 SPYAIVAMMG-VFGLERHITPLGSMIPALFC---KTA-------ACVDPYLYAATHPRFR 392
            :|:.::.|:. ||.:.....|.|.....||.   .||       ..:|..:||.:...||
 Worm   233 TPFYVIMMIEIVFQIIYQSPPSGDTRSELFVTVYNTAHYMYYMNTAIDVLVYAFSSANFR 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_GPCRs 118..395 CDD:475119 61/318 (19%)
TM helix 1 119..143 CDD:320207 6/23 (26%)
TM helix 2 152..173 CDD:320207 5/20 (25%)
TM helix 3 189..211 CDD:320207 4/27 (15%)
TM helix 4 234..250 CDD:320207 4/23 (17%)
TM helix 5 280..303 CDD:320207 7/22 (32%)
TM helix 6 329..351 CDD:320207 4/37 (11%)
TM helix 7 363..388 CDD:320207 9/34 (26%)
H09F14.1NP_001256232.1 7tm_GPCRs 10..295 CDD:475119 61/318 (19%)
TM helix 1 11..35 CDD:410628 6/23 (26%)
TM helix 2 44..65 CDD:410628 5/20 (25%)
TM helix 3 77..99 CDD:410628 3/21 (14%)
TM helix 5 159..182 CDD:410628 8/30 (27%)
TM helix 6 218..240 CDD:410628 2/21 (10%)
TM helix 7 263..288 CDD:410628 5/24 (21%)

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