DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and srsx-1

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_507347.1 Gene:srsx-1 / 185523 WormBaseID:WBGene00009566 Length:310 Species:Caenorhabditis elegans


Alignment Length:288 Identity:46/288 - (15%)
Similarity:100/288 - (34%) Gaps:82/288 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNIKEGP 181
            :.:|:...:.:::|..|:...:.:...:.:||:.::.|             :|.:::        
 Worm    10 ICIASEIVVFNILGLFGHFNFLCLTYKKPALRSKSSYL-------------QCVLSV-------- 53

  Fly   182 ALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFLF 246
              ..|.|.|:....      |....|.|.|.| ||          |....|..:..:  |:..:.
 Worm    54 --SHIICLLFEIPN------AALLFTGIRLKR-NV----------CFPAISIYVFFI--CFQAVM 97

  Fly   247 AVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPARIFMALFFVA-----------AYCIP------ 294
            .:|..:|:.:.|:....:....:.:|::..:......:.|.||           .:|.|      
 Worm    98 ILMLVIDLLIIVFFTTFYRKIGTINYISMMLVIPFIYSAFTVALGFLKMNDEVIIFCNPPIGLHP 162

  Fly   295 -------LTSIVYS-----YFYILKVVFTASRIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYA 347
                   :::::::     .|..|.:||.....:...|..|..:.|...|...|..|::......
 Worm   163 DVGRFWSMSNVIFNTITLFLFVFLMIVFHFKGKKQKSDTRKLMKSLKVSVIVFIFSWYMCMLAND 227

  Fly   348 IVAMMGVFGLERHITPLGSMIPALFCKT 375
            :...:|:.|      ||     .:|||:
 Worm   228 LFVAIGITG------PL-----LVFCKS 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 19/121 (16%)
7tm_1 133..384 CDD:278431 44/272 (16%)
srsx-1NP_507347.1 7TM_GPCR_Srsx 20..276 CDD:255903 45/278 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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