DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and Sstr3

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:NP_598206.1 Gene:Sstr3 / 171044 RGDID:620308 Length:428 Species:Rattus norvegicus


Alignment Length:374 Identity:90/374 - (24%)
Similarity:164/374 - (43%) Gaps:84/374 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCP-IAIYNNIKEG 180
            ::::.:|.::.|||.:||:.||::.....|..:..::.::|||:.|.|.::..| :|..|.:...
  Rat    46 ILISLVYLVVCVVGLLGNSLVIYVVLRHTSSPSVTSVYILNLALADELFMLGLPFLAAQNALSYW 110

  Fly   181 PALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYSFL 245
            | .|.:.|||...|.|::...:|..||.:::|||..||||.:..|..:...:.::...:|..|.:
  Rat   111 P-FGSLMCRLVMAVDGINQFTSIFCLTVMSVDRYLAVVHPTRSARWRTAPVARMVSAAVWVASAV 174

  Fly   246 FAVMPALDIGLSVY--VPEGFLTTCSFDYLNKEMPARIFMALFFVAAYCI----PLTSIVYSYFY 304
             .|:|.:     |:  ||.| ::||   ::....||..:...|.:....:    ||..|...|..
  Rat   175 -VVLPVV-----VFSGVPRG-MSTC---HMQWPEPAAAWRTAFIIYTAALGFFGPLLVICLCYLL 229

  Fly   305 I-LKVVFTASRIQSN----------KDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLE 358
            | :||..|..|:::.          :.:.::|:::..:|.|::.|:.|.|.|:.::.::.|    
  Rat   230 IVVKVRSTTRRVRAPSCQWVQAPACQRRRRSERRVTRMVVAVVALFVLCWMPFYLLNIVNV---- 290

  Fly   359 RHITPLGSMIPALF---------CKTAACVDPYLYAATHPRFRVEVRMLFYGRGVLRRVSTTRSS 414
              :.||... ||.|         ....:|.:|.||.....||:...|.      :|.|.|     
  Rat   291 --VCPLPEE-PAFFGLYFLVVALPYANSCANPILYGFLSYRFKQGFRR------ILLRPS----- 341

  Fly   415 YMTRSRSSFTHRLRTSTTGEGGMGDHRMENYLMNNNLMMVPEETEENEE 463
                      .|:|:...|.|                  .||:|||.|:
  Rat   342 ----------RRVRSQEPGSG------------------PPEKTEEEED 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 36/122 (30%)
7tm_1 133..384 CDD:278431 68/277 (25%)
Sstr3NP_598206.1 7tm_GPCRs 46..333 CDD:421689 76/304 (25%)
TM helix 1 47..73 CDD:410628 8/25 (32%)
TM helix 2 80..106 CDD:410628 7/25 (28%)
TM helix 3 117..147 CDD:410628 11/29 (38%)
TM helix 4 159..181 CDD:410628 4/27 (15%)
TM helix 5 204..233 CDD:410628 6/28 (21%)
TM helix 6 259..289 CDD:410628 7/29 (24%)
TM helix 7 301..326 CDD:410628 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..428 10/38 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166334349
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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