DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and LOC110440145

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_021336025.1 Gene:LOC110440145 / 110440145 -ID:- Length:356 Species:Danio rerio


Alignment Length:329 Identity:71/329 - (21%)
Similarity:136/329 - (41%) Gaps:43/329 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNI 177
            :|||   ..|..::.:||..||.:.:.:..:.....|...|.::|||:.|.|.|...|..:....
Zfish    23 TSTF---GTLLSVVYIVGVSGNVYTLVVMCHSIRFATSMYISIINLALADLLYLSTIPFVVCTYF 84

  Fly   178 KEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILL--IW 240
            .:....||:.||:...:..|:...:|.|||.:.::||..|..||..::|.   :||...:.  :|
Zfish    85 LKDWYFGDVGCRILLSLDLLTMHASIFTLTVMCMERYLAVTKPLDTVKRS---KSYRKAMAWGVW 146

  Fly   241 CYSFLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKEMPA--------RIFMALFFVAAYCIPLTS 297
            ..|.:      |.:.:.:.|.:...||.  |...|.|.|        ::::.:.|..:...|...
Zfish   147 ILSLV------LTLPMMIMVNQTTKTTA--DGGVKRMCAPTWAPQAYKLYLTVLFCTSIMAPGLV 203

  Fly   298 IVYSYFYILKVVFTASRIQSNK-DKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGV----FGL 357
            |.|.|..:.:....:.:..:.| .|...:||:..::..|:.:::..:.|:.|..::.:    |.|
Zfish   204 IGYLYTRLARTYLESQKTPAVKGSKRSPKQKVLIMIFTIVLVFWACFLPFWIWQLVPLYHKPFSL 268

  Fly   358 ERHITPLGSMIPALFCKTAACVDPYLYAATHPRFRVEVRMLFYGRGVLRRVSTTRSSYMTRSRSS 422
            ..|.....:.:.|....:.:|::|:||......:|..::              .|.....|..||
Zfish   269 ASHTHTSINYLVASLTYSNSCINPFLYTLLTKNYREYLK--------------NRHKSFYRYTSS 319

  Fly   423 FTHR 426
            |..|
Zfish   320 FKQR 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 32/123 (26%)
7tm_1 133..384 CDD:278431 56/265 (21%)
LOC110440145XP_021336025.1 7tmA_UII-R 25..306 CDD:320130 64/294 (22%)
TM helix 1 25..51 CDD:320130 7/28 (25%)
TM helix 2 58..82 CDD:320130 8/23 (35%)
TM helix 3 95..125 CDD:320130 9/29 (31%)
TM helix 4 137..158 CDD:320130 4/26 (15%)
TM helix 5 185..214 CDD:320130 5/28 (18%)
TM helix 6 230..260 CDD:320130 5/29 (17%)
TM helix 7 274..299 CDD:320130 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573365
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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