DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and LOC100005512

DIOPT Version :10

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_073798759.1 Gene:LOC100005512 / 100005512 -ID:- Length:295 Species:Danio rerio


Alignment Length:320 Identity:66/320 - (20%)
Similarity:121/320 - (37%) Gaps:78/320 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 SSTFLIMAALYCLISVVGCVGNAFVIFMFANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNI 177
            |...|:.:|:..|..|:|..||..|:.:.......|:....|:.:||:.|.:.|:..|:.|| .:
Zfish    16 SVDLLVSSAVLGLCFVLGVPGNIAVLVLLGQYLKDRSFTPKLMFSLAVSDLMSLLFMPVWIY-AL 79

  Fly   178 KEGPALGDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWC- 241
            ..|...|...|:|..::...|..|::.::..:::.||..|:||                 .||. 
Zfish    80 LNGWVFGQALCKLLSYIVYWSLYCSVLSVCLLSVQRYLQVLHP-----------------QIWAT 127

  Fly   242 -----YSFLFAVMPALDIGLSVYV--------PEGFLTTCSFDYLNKEMPARIFMALFFVAAYCI 293
                 .|.:.:.:..|...|..|.        .|..|..|. .|..|::...:.:.:..:..:.:
Zfish   128 LGEKNQSGMISAIWTLSAALGSYALHYQNVMKKENGLLYCD-QYFKKDLGKIMVLIVEALLMFIV 191

  Fly   294 PLTSIVYSYFYILKVVFTASRIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSP-----YAIVAMMG 353
            ||.|::..||.:.:.|..:....|:        :|..:...|:..:|:...|     :..:||  
Zfish   192 PLLSLLCFYFGLHRRVSQSVSFSSH--------RLTTLSIRIVVTFFIFGIPCTINHFVAIAM-- 246

  Fly   354 VFGLERHITPLGSMIPALFCKTAA------CVDPYLYAATHPRFRVEVRMLFYGRGVLRR 407
                     |..|.:  |:..|.|      .::|.|||             |..|.:|:|
Zfish   247 ---------PWKSEV--LYNATGALFFINNSINPILYA-------------FSARSLLQR 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_GPCRs 118..395 CDD:475119 60/301 (20%)
TM helix 1 119..143 CDD:320207 7/23 (30%)
TM helix 2 152..173 CDD:320207 6/20 (30%)
TM helix 3 189..211 CDD:320207 3/21 (14%)
TM helix 4 234..250 CDD:320207 3/21 (14%)
TM helix 5 280..303 CDD:320207 3/22 (14%)
TM helix 6 329..351 CDD:320207 3/26 (12%)
TM helix 7 363..388 CDD:320207 9/30 (30%)
LOC100005512XP_073798759.1 None

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