DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rh7 and cmklr2

DIOPT Version :9

Sequence 1:NP_524035.2 Gene:Rh7 / 39389 FlyBaseID:FBgn0036260 Length:483 Species:Drosophila melanogaster
Sequence 2:XP_001343514.2 Gene:cmklr2 / 100004124 ZFINID:ZDB-GENE-091204-457 Length:356 Species:Danio rerio


Alignment Length:365 Identity:88/365 - (24%)
Similarity:161/365 - (44%) Gaps:63/365 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 LIMAALYCLISVVGCVGNAFVIFM--FANRKSLRTPANILVMNLAICDFLMLIKCPIAIYNNIKE 179
            :|...:|.|...:|.:||..||::  |..::|:.   ::.:.||||.||:.::..|.:|...:::
Zfish    38 IISVIIYSLAFTLGIIGNGTVIWVTGFKIKRSIN---SVWLQNLAIADFVFVLFLPFSIDYVLRD 99

  Fly   180 GPAL-GDIACRLYGFVGGLSGTCAIGTLTAIALDRYNVVVHPLQPLRRCSRLRSYLIILLIWCYS 243
            ...| |...|:|..||..::...::..||.::||||...||.....:..:..||:.:..|||..|
Zfish   100 FHWLFGKTMCKLNSFVCTMNMYASMLFLTVLSLDRYVSFVHFSWSQKYRNVRRSWWLCALIWIIS 164

  Fly   244 FLFAVMPALDIGLSVYVPEGFLTTCSFDYLNKE----MPARIFMALFF--VAAYCIPLTSIVYSY 302
            .:|: .||| :...|.:..|.: .| |::.:.|    |..|....:.|  :..:.:|..:|..| 
Zfish   165 CIFS-CPAL-VFRDVILYNGKI-VC-FNHFHDEDRHVMKMRHIGIVSFRTIVGFILPFATITVS- 224

  Fly   303 FYILKVVFTASRIQSNKDKAKTEQKLAFIVAAIIGLWFLAWSPYAIVAMMGVFGLERHITPLGSM 367
                .|:......|||..:..:..::   |:|:|..:|:.|:|:...::|.:  ...|.|.|.|:
Zfish   225 ----GVLLALKMRQSNSVRLSSFSRM---VSAVILAFFVCWAPFHTFSIMEL--SVHHSTALNSV 280

  Fly   368 IPALFCKTA------ACVDPYLYAATHPRFR--VEVRMLFYGRGVLRRVSTTRSSYMTRSRSSFT 424
            :...|....      :||:|.||.....:.|  |:...|.:.:..||.:|.:.|:          
Zfish   281 LTIGFPLATSLAFFNSCVNPILYVLLTKKVRKLVKSACLKFTKSSLRELSQSASA---------- 335

  Fly   425 HRLRTSTTGEGGMGDHRMENYLMNNNLMMVPEETEENEEI 464
                           ..:::.|:|    ..|||..||..:
Zfish   336 ---------------TELDSALVN----CAPEEPAENSTV 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rh7NP_524035.2 7tm_4 125..>247 CDD:304433 36/124 (29%)
7tm_1 133..384 CDD:278431 68/265 (26%)
cmklr2XP_001343514.2 7tm_1 54..303 CDD:278431 68/265 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170573361
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24229
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.030

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