DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-IV and cntnap1

DIOPT Version :9

Sequence 1:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_694580.5 Gene:cntnap1 / 566220 ZFINID:ZDB-GENE-030916-2 Length:1309 Species:Danio rerio


Alignment Length:1284 Identity:381/1284 - (29%)
Similarity:607/1284 - (47%) Gaps:161/1284 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 ARLNGNAAWTPVENTYNHFLTLDLGDPRMVRKIATMGRMHTDEFVTEYIVQYSDDGEFWRSYVNP 135
            |:|.|::.|:|.......::.:|||....:..|||.|..::.::||:|:|.|.|..:.|..||  
Zfish    52 AKLYGSSGWSPSTRDRQPWMQIDLGRKYRIMAIATQGTFNSYDWVTKYMVLYGDRFDSWTPYV-- 114

  Fly   136 TSEPQMFKGNS--DGNSIHY----NVFEVPIIAQWVRINPTRWH----DRISMRVELYGCDYISE 190
                 |..||.  .||..:|    |||.....|:.:||.|..|:    .:|.:|||.|||.|.|.
Zfish   115 -----MKGGNMTLPGNWNYYQVKRNVFHYAFTAKHLRIYPMGWNTENGGKIGLRVEFYGCPYDSY 174

  Fly   191 NLYFNGTGLVRYDLRREPITSTKESIRFRFKTAFANGVMMYSRGTQGDYYALQLKDNKMVLNLDL 255
            .:.|.|..:|.|...|..:.:.::.....|||...:|::::|.|.|||...|:||..::.|::.|
Zfish   175 VMNFEGDDMVAYSFPRGRMRTLQDHYALNFKTLEKDGILLHSEGLQGDSITLELKTGRLYLHISL 239

  Fly   256 GSRV------MTSLSVGSLLDDNVWHDVVISRNQRDIIFSVDRVIVRGRIQGEFTRLNLNRELYL 314
            ||..      ||::.:|:|||...||.|.|.|..|::.|::|.......:.|||..|:|::::|:
Zfish   240 GSSTVHNTNGMTTMMLGNLLDTQHWHYVTIKRFGRELNFTLDSQTETTILNGEFQHLDLDKKIYV 304

  Fly   315 GGV-----PNVQEGLIVQQNFSGCLENIYFNSTNFIRVMKDSTELGEGYLFTRVNTI-YACPSPP 373
            |||     |:: .|.:   ||.||:||::.|..|.|.:.::...  |..|..:...: |.|....
Zfish   305 GGVIEKDMPHL-PGKV---NFRGCMENVFINGINIIYMTQNQEP--EIRLAPKKKKMHYMCRDLL 363

  Fly   374 IYPVTFTTRSSFVRLKGYENSQRLNVSFYFRTYEETGVMLHHDFYSG-GYLKVFLEFGKVKIDLK 437
            ..|:||...:::::|.|:....||.|.|.||:::.||:::...|... |.|::.|..|:|.:.|.
Zfish   364 WKPMTFAGPNNYLQLPGFFRKNRLAVKFKFRSWDYTGLLMFTRFADELGSLELGLSEGQVNVTLM 428

  Fly   438 VKDKARI-ILDNYDDQFNDGKWHSFVISIEKNRLILNIDQ---RPMTTTKSMQVATGAQYYIAGG 498
            .....|: ....|  :.|||.||:..::.:.|.|.:.||:   .|:..|....|.||.:|:..|.
Zfish   429 QPGNKRLRFAAGY--RLNDGFWHTVDLTAKDNLLTITIDEDESSPLKITNPFMVRTGDRYFFGGC 491

  Fly   499 KDKNG----------FVGCMRLISVDG-----NYKLPQDWVKGEEVCCGDDVVVDACQMIDRCNP 548
            ...|.          |.|||:.|.:|.     :..|.:.|.:..|:..|      .|.:.|||:|
Zfish   492 PKTNNTARCVTKLSRFHGCMQQIFIDDEPVDIDVMLQRKWGRYAEILLG------TCGITDRCSP 550

  Fly   549 NPCQHKGLCHQNSREFFCDCGHTGYAGAVCHTSNNPLSCLALK-NVQHVQQRVNLNLDVDGSGPL 612
            |||:|:|.|.|:..:|.|.|.:|||.|.|||.|....||.|.: |.::...  |..:|.|.||||
Zfish   551 NPCEHEGRCIQSWNDFLCVCNNTGYKGEVCHNSVYRESCEAYRLNGKYWSG--NYTIDPDLSGPL 613

  Fly   613 EPFPVTCEFYSDGRVITTLSHSQEHTTTVDGFQEPGSFEQSIMY-DANQLQIEALLNRSHSCWQR 676
            :||.|.|....  :..|.:.|::..:|.|.|......:...:.| :|:..::.||.|.|..|.|.
Zfish   614 KPFTVYCNMLQ--KTWTVIEHNRMKSTKVSGSTIDRPYIGDVQYVNASWDEVTALANTSLYCEQW 676

  Fly   677 LSYSCRSSRLFNSPSEAGNFRPFSWWISRHNQPMDYWAGALPGSRKCECGILGKCHDPTKWCNCD 741
            :.:||..|||.|:|    :.||:::||.|||:..:||.||.|.|.||.|.:...|.|...|||||
Zfish   677 IEFSCYKSRLLNTP----HGRPYTYWIGRHNESHEYWGGAFPESGKCGCAVNQTCTDSKYWCNCD 737

  Fly   742 SNSLEWMEDGGDIREKEYLPVRAVKFGDTGTPLDEKMGRYTLGPLRCEGDDLFSNVVTFRIADAS 806
            ::..:|..|.|.:..:::||:|.:..|||.....|  .:|::|.|.|.||....|.:.| .....
Zfish   738 ADYRQWHSDKGYLSFRDHLPIRRLVIGDTNRTGSE--AQYSVGALYCHGDRSIWNTIAF-TKPTY 799

  Fly   807 INLPPFDMGHSGDIYLEFRTTQENSVIFHATGP--TDYIKLSLNGGNKLQFQYQAGSGPLGVNVG 869
            :..|.|..|.|.||...|||.:...|...|:..  .:::::.||...::.|.:..|.|...|.:.
Zfish   800 LTFPTFKPGTSADITFHFRTYRTYGVFVEASDDHLRNFLRVELNSTTEVVFIFMVGDGIRNVTLR 864

  Fly   870 TSYHLNDNNWHTVSVERNRKEARLVVDGSIKAEVREPPGPVR-ALHLTSDLVIGATTEYRDGYVG 933
            :...||||.||.|..|.|.|.|||.|| .:...:.:.||... .:..|..|::||.......::|
Zfish   865 SPKALNDNEWHYVEAEINVKLARLKVD-FLPPAIHKFPGQTYITMDFTQPLLVGAANHTLRPFLG 928

  Fly   934 CIRALLLNGKMVDLKEYSKRGLYGISTGCVGRC--ESNPCLNNGTCIERYDGYSCDCRWSAFKGP 996
            |:|.|.:||..|||:....... ||...|.|.|  .|.||.|.|.||:.|..|:|||..:.|.|.
Zfish   929 CLRGLRMNGVPVDLEGKVDESA-GIRRNCTGACLNASIPCRNGGQCIDGYASYACDCNNTGFDGY 992

  Fly   997 ICADEIGVNLRSSSIIRYEFEG---SF-------------------RSTIAENIRVGFTTTIPKG 1039
            .|..:||......:.:||:...   ||                   .:|..::|...|:|.....
Zfish   993 YCHLDIGAFFDVGAWLRYDVRKEPISFDAWWANFWIEPHWHNFTLGYNTTTDDIEFSFSTLQAPA 1057

  Fly  1040 FLLGFSSNLTGEYLTIQISNSGHLRCVFDFGFERQEIIFPKKHFGLGQYHDMHFMRKNGGSTVVL 1104
            .|| :.|:.:.:|:.:.:...|.|...:..|....:.....::...|..|.::..|.|  .||..
Zfish  1058 VLL-YISSFSNDYIAVLLKKDGTLSMRYRLGIISYKFKMTDRNMADGFPHFVNITRHN--YTVWT 1119

  Fly  1105 KVDNYEP-VEYNFDIKASADAQFNNIQYMYIGK-----------NESMTDGFVGCVSRVQFDDIY 1157
            :||..:| :|   .:......:|::.:.:::|:           ....:.||:||:|.|:::...
Zfish  1120 QVDYMDPWIE---KLVPGEIPRFDSPKSIFLGRVMEVGGVDYEIQRHNSPGFMGCISGVRYNIFA 1181

  Fly  1158 PLKLMFQ---QNPPKNVKSLGTQLTEDFCGVEPVTHPPIEIETRP---------------PPLVD 1204
            |||..|:   .|||...:.   .:.|..||..|.....:..|..|               ||.: 
Zfish  1182 PLKAYFRPNVTNPPVTTQG---YVVESNCGAFPPVLGYVPWEDDPWFTGLFFYYIHDDVTPPWM- 1242

  Fly  1205 EEKLRKAYNEVDSVLLACLLVILFLLLILMFFLIGRYLHRHKGDYLTHE 1253
                        ::::...|::|||:|..::.    ||:|:||.|.|:|
Zfish  1243 ------------TLIVTVSLMLLFLILYGLYI----YLYRYKGSYHTNE 1275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-IVNP_524034.2 FA58C 46..185 CDD:214572 40/123 (33%)
FA58C 57..184 CDD:238014 39/122 (32%)
LamG 192..340 CDD:238058 52/158 (33%)
LamG 376..514 CDD:238058 44/152 (29%)
EGF 546..575 CDD:278437 15/28 (54%)
Laminin_G_2 824..943 CDD:280389 37/121 (31%)
EGF_CA 966..998 CDD:238011 15/33 (45%)
Laminin_G_2 1032..1156 CDD:280389 27/135 (20%)
4.1m 1239..1255 CDD:128590 8/15 (53%)
cntnap1XP_694580.5 FA58C 23..169 CDD:214572 40/123 (33%)
FA58C 38..168 CDD:238014 39/122 (32%)
Laminin_G_2 204..333 CDD:280389 48/132 (36%)
LamG 366..517 CDD:238058 44/152 (29%)
EGF 548..578 CDD:278437 15/29 (52%)
FReD 588..>632 CDD:294064 16/47 (34%)
LamG 791..936 CDD:238058 43/146 (29%)
EGF_CA 960..994 CDD:238011 15/33 (45%)
Laminin_G_2 1050..1178 CDD:280389 27/133 (20%)
4.1m 1260..1278 CDD:128590 8/20 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 216 1.000 Domainoid score I2641
eggNOG 1 0.900 - - E1_KOG3516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 673 1.000 Inparanoid score I703
OMA 1 1.010 - - QHG48725
OrthoDB 1 1.010 - - D171014at33208
OrthoFinder 1 1.000 - - FOG0000323
OrthoInspector 1 1.000 - - otm24366
orthoMCL 1 0.900 - - OOG6_101349
Panther 1 1.100 - - O PTHR15036
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X247
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.880

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