DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrx-IV and tld

DIOPT Version :9

Sequence 1:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_524487.2 Gene:tld / 42945 FlyBaseID:FBgn0003719 Length:1067 Species:Drosophila melanogaster


Alignment Length:1281 Identity:218/1281 - (17%)
Similarity:357/1281 - (27%) Gaps:573/1281 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 YNHFLTLDLGDP-RMVRKIATMGRMHTDEFVTEYIVQYSDDGEFWRSYVNPTSEPQMFKGNSDGN 149
            ::|..||: |.| :..|:..|:.:..|                 |...|.|.....:|.|     
  Fly   120 HSHSPTLN-GQPIQRRRRAVTVRKERT-----------------WDYGVIPYEIDTIFSG----- 161

  Fly   150 SIHYNVFEVPIIAQW--------VRINPTRWHDRISMRVELYG-CDYISENLYFNGTGLVRYDLR 205
             .|..:|: ..:..|        |..:|....:.|...|:..| |.::.:    ||.|       
  Fly   162 -AHKALFK-QAMRHWENFTCIKFVERDPNLHANYIYFTVKNCGCCSFLGK----NGNG------- 213

  Fly   206 REPITSTKESIRFRFKTAFANGVMMYSRG---------TQGDYYALQLKDNKMVLNLDLGSRVMT 261
            |:||:..:...:|        |::::..|         .:||      :|..:|:|         
  Fly   214 RQPISIGRNCEKF--------GIIIHELGHTIGFHHEHARGD------RDKHIVIN--------- 255

  Fly   262 SLSVGSLLDDNVWHDVVISRNQRD---IIFSVDRVIVRGRIQGEFTRLNLNRELYLG-----GVP 318
               .|:::....::..|:|..:.|   :.:.::.::       .:.:.:.::..||.     |:|
  Fly   256 ---KGNIMRGQEYNFDVLSPEEVDLPLLPYDLNSIM-------HYAKNSFSKSPYLDTITPIGIP 310

  Fly   319 NVQEGLIVQQNFSGCLENIYFNSTNFIRVMKDSTELGEGYLFTR-----VNTIYACPSPPIYPVT 378
                                 ..|:.        |||:....:|     .|.:|.|.|       
  Fly   311 ---------------------PGTHL--------ELGQRKRLSRGDIVQANLLYKCAS------- 339

  Fly   379 FTTRSSFVRLKGYENSQRLNVSFYFRTYEETG--VMLHHDFYSG-GYLKVFLEFGKVKID----- 435
                                   ..|||::..  ::..|..||| |.|..|...|....|     
  Fly   340 -----------------------CGRTYQQNSGHIVSPHFIYSGNGVLSEFEGSGDAGEDPSAES 381

  Fly   436 ------------LKVKDKARIILD-------NYDD------QFNDGKWHSF-------------V 462
                        :...:..::||.       :.||      :..||.||..             |
  Fly   382 EFDASLTNCEWRITATNGEKVILHLQQLHLMSSDDCTQDYLEIRDGYWHKSPLVRRICGNVSGEV 446

  Fly   463 ISIEKNRLILNIDQRPMTTTKSMQVATGAQYYIAGGKDKNGFVGCMRLISVDGNYKLPQDWVKGE 527
            |:.:.:|::||...|                  ...|...||....                   
  Fly   447 ITTQTSRMLLNYVNR------------------NAAKGYRGFKARF------------------- 474

  Fly   528 EVCCGDDVVVDACQMIDRCNPN-----------------PCQHKGLCHQNSREFFCDCGHTGYAG 575
            ||.||.|:.:...|.||  :||                 |..|:......|.|..   .|.|.| 
  Fly   475 EVVCGGDLKLTKDQSID--SPNYPMDYMPDKECVWRITAPDNHQVALKFQSFELE---KHDGCA- 533

  Fly   576 AVCHTSNNPLSCLALKNVQHVQQRVNLNLDVDGSGPLEPFPVTCEFYSDGRVITTLSHSQEHTTT 640
                             ...|:.|       ||:            :||.|:|            
  Fly   534 -----------------YDFVEIR-------DGN------------HSDSRLI------------ 550

  Fly   641 VDGFQEPGSF-----EQSIMYDANQLQIEALLNRSHSCWQRLSYSCRSSRLFNSPSEAGNFRPFS 700
                   |.|     ..:|...:||:.|..:   |.|..|:|.:|                    
  Fly   551 -------GRFCGDKLPPNIKTRSNQMYIRFV---SDSSVQKLGFS-------------------- 585

  Fly   701 WWISRHNQPMDYWAGALPGSRKCECGILGKCHDPTKWCNCDSNSLEWMEDGGDIREKEYLPVRAV 765
                          .||                                         .|.|...
  Fly   586 --------------AAL-----------------------------------------MLDVDEC 595

  Fly   766 KFGDTGTP--LDEKMGRYTLG-----PLRCEG---DDLFSNVVTFRIADASINLPPFDMGHSGDI 820
            ||.|.|..  ....:|.|..|     .|:..|   :|....||....::.|:..|.:.     |:
  Fly   596 KFTDHGCQHLCINTLGSYQCGCRAGYELQANGKTCEDACGGVVDATKSNGSLYSPSYP-----DV 655

  Fly   821 YLEFRTTQENSVIFHATGPTDYIKLSLNGGNKLQFQYQAGSGPLGVNVGTSYHLNDNNWHTVSVE 885
            |     ......::....|.:: .:.||..:   |..:          ||.:|....|:..:.:.
  Fly   656 Y-----PNSKQCVWEVVAPPNH-AVFLNFSH---FDLE----------GTRFHYTKCNYDYLIIY 701

  Fly   886 RNRKEARLVVDGSIKAEVREPP-----GPVRALHLTSDLVIGATTEYRDGYVGCIRALLLNGKMV 945
            ...::.||...| |......||     ..:..|...||     .|..|.|:|...        ::
  Fly   702 SKMRDNRLKKIG-IYCGHELPPVVNSEQSILRLEFYSD-----RTVQRSGFVAKF--------VI 752

  Fly   946 DLKEYSKRGLYGISTGCVGRCESNPCLNNGTCIER----YDGYSCDCRWSAFKGPICADEIGVNL 1006
            |:.|.|                    :|||.|..|    :..|.|.||    .|...|:    |.
  Fly   753 DVDECS--------------------MNNGGCQHRCRNTFGSYQCSCR----NGYTLAE----NG 789

  Fly  1007 RSSSIIRYEFEGSFRSTIAENIRVGFTTTIPKGF------------LLGFSSNLTGEYLTIQISN 1059
            .:.:..|.:||      |..:..|..:...|:.:            :||....||.....::   
  Fly   790 HNCTETRCKFE------ITTSYGVLQSPNYPEDYPRNIYCYWHFQTVLGHRIQLTFHDFEVE--- 845

  Fly  1060 SGHLRCVFDF-------------------GFERQEIIFPKKHFGLGQYHDMHFMRKNGGSTVV-- 1103
             .|..|::|:                   |.|...:|.......:....|....||...:|.|  
  Fly   846 -SHQECIYDYVAIYDGRSENSSTLGIYCGGREPYAVIASTNEMFMVLATDAGLQRKGFKATFVSE 909

  Fly  1104 ----LKVDNYEPVEYNFDIKASADAQFNNIQYMYIGKNESMTDGFVGCVSRVQFDDIYPLKLMF- 1163
                |:..|:....|:.....|...:.|    ||             |..|:|.|....:|:.| 
  Fly   910 CGGYLRATNHSQTFYSHPRYGSRPYKRN----MY-------------CDWRIQADPESSVKIRFL 957

  Fly  1164 ----QQNPPKNVKSLGTQLTED----------FCGVEPVTHPPIEI 1195
                :.:...:...|  ::||:          |||..   .|||.|
  Fly   958 HFEIEYSERCDYDYL--EITEEGYSMNTIHGRFCGKH---KPPIII 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-IVNP_524034.2 FA58C 46..185 CDD:214572 21/108 (19%)
FA58C 57..184 CDD:238014 20/106 (19%)
LamG 192..340 CDD:238058 22/164 (13%)
LamG 376..514 CDD:238058 29/183 (16%)
EGF 546..575 CDD:278437 8/45 (18%)
Laminin_G_2 824..943 CDD:280389 21/123 (17%)
EGF_CA 966..998 CDD:238011 10/35 (29%)
Laminin_G_2 1032..1156 CDD:280389 27/160 (17%)
4.1m 1239..1255 CDD:128590
tldNP_524487.2 ZnMc_BMP1_TLD 137..338 CDD:239808 45/297 (15%)
Astacin 144..339 CDD:279708 45/291 (15%)
CUB 388..474 CDD:214483 17/103 (17%)
CUB 478..586 CDD:278839 34/205 (17%)
FXa_inhibition 595..630 CDD:291342 9/34 (26%)
CUB 634..750 CDD:278839 27/145 (19%)
FXa_inhibition 757..792 CDD:291342 13/62 (21%)
CUB 797..906 CDD:278839 18/118 (15%)
CUB 910..1023 CDD:278839 23/111 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45444944
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.