DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nrx-IV and kon

DIOPT Version :10

Sequence 1:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster
Sequence 2:NP_609881.3 Gene:kon / 35104 FlyBaseID:FBgn0032683 Length:2381 Species:Drosophila melanogaster


Alignment Length:1135 Identity:223/1135 - (19%)
Similarity:395/1135 - (34%) Gaps:304/1135 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 SMRVELYGCDYISENLYFNGTGLVRYDLRREPITSTKESIRFRFKTAFANGVMMYSRGTQGDYYA 241
            :|:|.|:|..|:|..|             :|...||  :||.:|:|...|..:..:.| :.||..
  Fly    27 AMKVSLFGDGYVSMPL-------------QEAKMST--NIRVKFRTRQENAFLFLAAG-RTDYCL 75

  Fly   242 LQLKDNKMVLNLDLGSRVMTSLS-VGSLLDDNVWHDVVISRNQRDIIFSVDRVIVRGRIQGEFTR 305
            |:|:...:..:..:...|:...| ....|:|..||||.:.|.:.:|...||..|:|.::.|:...
  Fly    76 LRLESGLISFSYKIERDVVQLRSPKKQKLNDLEWHDVAVQRFENNITLQVDGYIMRKQLPGDLAA 140

  Fly   306 LNLNRELYLGGVPN-VQEGLIVQQNFSGCLENIYFNSTNFIRVMKDSTELGEGYLFTRVNTIYAC 369
            ||::...:||||.: ..|.|.....|.||:.::::|:.|.|:..||.|.     ..|.....:.|
  Fly   141 LNIHFGTFLGGVGDFTAEFLDDVIGFRGCISDVFYNNINIIKRAKDRTS-----HTTSTGVAWTC 200

  Fly   370 PSPPIYPVTFTTRSSFVRLKGYENSQRLN------VSFYFRTYEETGVMLHHDFYSGGYLKVFLE 428
            .:.  :..:.....||:|...|....:.:      :|..|||....||:    |::|||..:.||
  Fly   201 STE--FEGSIQDSISFMRNDSYSLMMKESYAMGETLSLQFRTMASAGVI----FFNGGYDFILLE 259

  Fly   429 FGKVKIDLKVKDKARIILDNYDDQFNDGKWHSFV------------------------------I 463
            .....:.:.......::....::..:|||||...                              |
  Fly   260 IEDQHLKVTFNKAGSLVQFMTNEHISDGKWHRVFLRYNAAIAELSLDDATSGYRGTHANETKASI 324

  Fly   464 SIEKNRLILNI--DQRPMTTTKSMQVATGAQYYIAGGKDKNGFVGCMRLISVDGNYKLPQDWVKG 526
            ::||:.....:  :.|....:|.:::            ::..|.||||.|.|:   .||..:.  
  Fly   325 NLEKSVFFGGVQEEMRRRLISKGLRI------------NEISFKGCMRDILVN---DLPLGFA-- 372

  Fly   527 EEVCCGDDVVVDACQMIDRCNPNPCQHKGLCHQNSREFFCDCGHTGYAGAVCHTSNNPLSCLALK 591
             |:.....:.::..........|||...|:|.|:           |..|.:|:...:  .|    
  Fly   373 -EMTISRSLALNCLWKYPCVEYNPCLKSGICSQH-----------GVDGFICYCDQS--YC---- 419

  Fly   592 NVQHVQQRVNLNLDVDGSGPLEPFPVTCE-----FYSDGRVI---TTLSHSQEHTTTVDGFQEPG 648
                        :..|..||.:.|..|..     :.|..:::   |...........:|..:.|.
  Fly   420 ------------IKADFQGPFKIFTETSPELELLYVSPMQLLEGGTAFLSPHFIDIILDLRRYPS 472

  Fly   649 SFEQSIMYD-ANQLQIEALLNRSHSCWQRLSYSCRSSRLFNSPSEAGNFRPFSWWISRHNQPMDY 712
            ..||||::. .:|.:...||  .:|..:.:...||:..|.:..::...:        .||...::
  Fly   473 LNEQSIIFHVVHQPKYGQLL--QYSAEKAIFVPCRTFNLVDLATDKLKY--------VHNGQENF 527

  Fly   713 WAGALPGSRKCECGILGKCHDPTKWCNCDSNSLEWMEDGGDIRE--KEYLPVRAVKFGDTGTPLD 775
                                       .|..:|: |:..||:.:  :..|...........||::
  Fly   528 ---------------------------NDHATLD-MQIFGDVHKIPENILGKHRFLLHANITPIN 564

  Fly   776 E--KMGRYTLGPLR-CEGDDLFSNVVTFRIADASINLPPFDMGHSGDIYLEFRTTQENSVIFHAT 837
            :  ::..::...|| .||.:...:|..|.|.|     |..:.|:.....|..::.||....|...
  Fly   565 DPPQLRLHSHKILRVIEGIERVLDVDLFNIDD-----PDSEPGNLIYTILPTQSPQETFGCFIVG 624

  Fly   838 GPTDYIKLSLNGGNKLQFQYQAGSGPLGVNVG-TSYHLNDNNWHTVSVERNRKEARLVVDGSIKA 901
            |.|                 .:......|||| .||..|.....:.|.|...:    |.||...:
  Fly   625 GAT-----------------TSAFSQAEVNVGKVSYLYNSTTAESFSYELQLQ----VSDGIETS 668

  Fly   902 EVREPPGPVRALHL-------------------TSDLVIGATTEYRDGYV------------GCI 935
            |....|..|..|.|                   |::|.||  |...|.::            |.:
  Fly   669 ETVYLPVSVHPLELRLVNNTGLIMIHKSSLPISTANLSIG--TNAVDDHIDIRYDIVKAPQHGVL 731

  Fly   936 RAL-LLNGKMVDLKEYSKRGLYGISTGCVGRCESNPCLNNGTCIERYDGYSCDCRWSAFKGPICA 999
            :.| .::|..|::..:|...|      .:|..             || .:|.|..|.        
  Fly   732 QRLRQIDGSWVNVDWFSDSQL------LLGHI-------------RY-LHSSDFPWQ-------- 768

  Fly  1000 DEIGVNLRSSSIIRYEFEGSFRSTIAENIRVGFTTTIPKGFLLGFSSN--LTGEYLTIQISNSGH 1062
            ||.........:....|:  ||.|..   |:..|:|.|....:..|..  ||.:.|:.:.:..| 
  Fly   769 DEFKFIASFGFVTTQTFD--FRITFT---RLRITSTRPSQISINGSREILLTSDVLSYETTPIG- 827

  Fly  1063 LRCVFDFGFERQ---EIIFPKKHFGLGQYHDMHFMRKNGGSTVVLKVDNYEPVEYNFDIKASADA 1124
                   .|.|.   :|..|.::.|:  |.:       |......|:|::          ...|.
  Fly   828 -------SFARSVIYKITKPTRYGGI--YVE-------GSRKAAKKLDSF----------TQQDI 866

  Fly  1125 QFNNIQYM-YIGKNESMTDGFVGCVSRVQFDDIYPLKLMFQQNPPKNVKSLGTQLTEDFCGVEPV 1188
            :...|:|. :.....|.:|.....||..:.||:..:..:..:.|.:.:..||.|           
  Fly   867 EKRRIRYQTHHTSYSSFSDHLEFVVSVAECDDVAGVLEINYRPPDELINKLGYQ----------- 920

  Fly  1189 THPPIEIETRPPPLVDEEKLRKAYNEVDSV 1218
            .|.|::::.....|:.:......:|..:|:
  Fly   921 NHEPLQVQEGERALITKNHFGIRFNIYESL 950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-IVNP_524034.2 FA58C 57..184 CDD:238014 3/6 (50%)
LamG 192..340 CDD:238058 40/149 (27%)
LamG 376..514 CDD:238058 32/175 (18%)
EGF 546..575 CDD:394967 7/28 (25%)
LamG 819..943 CDD:214598 31/156 (20%)
EGF_CA 966..998 CDD:238011 5/31 (16%)
Laminin_G_2 1032..1156 CDD:460494 25/129 (19%)
4.1m 1239..1255 CDD:128590
konNP_609881.3 LamG 30..176 CDD:238058 45/161 (28%)
LamG 211..365 CDD:238058 32/169 (19%)
Cadherin_3 <445..535 CDD:465048 18/127 (14%)
Cadherin_3 552..664 CDD:465048 28/137 (20%)
Cadherin_3 667..773 CDD:465048 25/135 (19%)
Cadherin_3 781..892 CDD:465048 27/142 (19%)
Cadherin_3 921..1005 CDD:465048 5/30 (17%)
Cadherin_3 1025..1121 CDD:465048
Cadherin_3 <1149..1230 CDD:465048
Cadherin_3 1264..1361 CDD:465048
Cadherin_3 1369..1464 CDD:465048
Cadherin_3 1470..1578 CDD:465048
Cadherin_3 1821..1932 CDD:465048
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.