DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-IV and Cntnap5b

DIOPT Version :9

Sequence 1:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_017454266.1 Gene:Cntnap5b / 301650 RGDID:1565194 Length:1307 Species:Rattus norvegicus


Alignment Length:1383 Identity:426/1383 - (30%)
Similarity:681/1383 - (49%) Gaps:182/1383 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 PRSNTKAAFSSLQFGLLCLLLLVNNGIKSVQADAFTDYFSDYDCNQPLMERAVLTATSSLTE--R 66
            ||.|:             :|.||.:|:......|     ::|:|:.||.....|.|.||.::  .
  Rat     5 PRLNS-------------VLTLVLSGLWHFGLTA-----TNYNCDDPLASFLSLRAFSSSSDVTG 51

  Fly    67 GPDKARLN---GNAAWTPVENTYNHFLTLDLGDPRMVRKIATMGRMHTDEFVTEYIVQYSDDGEF 128
            ....|.||   |...|:|..:....:|.:|||:...:..:||.||..:.::||.|.:.:||.|..
  Rat    52 SSSPAHLNWRMGTGGWSPAYSNAQQWLQIDLGNRVEITAVATQGRYGSSDWVTSYRLMFSDTGHN 116

  Fly   129 WRSYVNPTSEPQM--FKGNSDGNSIHYNVFEVPIIAQWVRINPTRWH--DRISMRVELYGCDYIS 189
            |:.|   ..|..:  |.||.:.:|:.::.....:.|::||..|.:|:  .:|.||:|:|||.|.|
  Rat   117 WQEY---KQEDNIWTFVGNMNADSVVHHKLLHSVRARFVRFVPLKWNPDGKIGMRMEVYGCSYRS 178

  Fly   190 ENLYFNGTGLVRYDLRREPITSTKESIRFRFKTAFANGVMMYSRGTQGDYYALQLKDNKMV--LN 252
            :...|:|...:.|...::.:::.|:.|..:||:...:||:::..|.:|||..|:|::.::.  ||
  Rat   179 DVADFDGHSSLLYRFNQKTMSTLKDMISLKFKSMQGDGVLLHGEGQRGDYITLELQNGRLALYLN 243

  Fly   253 LDLGSRVMTSLS----VGSLLDDNVWHDVVISRNQRDIIFSVDRVIVRGRIQGEFTRLNLNRELY 313
            ||.|...::|::    :||||||..||.|::.|..:...|:||......:|:.|...|:::.||.
  Rat   244 LDGGQARLSSIAPSAILGSLLDDQQWHSVLLERVGKQTNFTVDTNTEHFQIKAETDALDIDYELS 308

  Fly   314 LGGVP-NVQEGLIVQQNFSGCLENIYFNSTNFIRVMKDSTELGEGYLFTRVNTIYACPSPPIYPV 377
            .||:| ..:.|..::::|.||:||:|:|..|.|    |..:..:..:::..|..::|..|.|.|:
  Rat   309 FGGIPIPSKPGTFLKKSFHGCIENLYYNGVNII----DLAKRRKHQIYSVGNVTFSCSEPQIVPI 369

  Fly   378 TF-TTRSSFVRLKGYENSQRLNVSFYFRTYEETGVMLHHDF-YSGGYLKVFLEFGKVKIDL-KVK 439
            || .:|||::.|.|......|:|||.|||:.|.|::|..:. .|.|.|.:.||.|.:::.: ||.
  Rat   370 TFVNSRSSYLLLPGTPRIDGLSVSFQFRTWNEDGLLLSTELSESSGTLLLILEGGTLRLLIKKVA 434

  Fly   440 DKARIILDNYDDQFNDGKWHSFVISIEKNRLILNIDQRPMTTTKS---MQVATGAQYYIAGGKDK 501
            .....|:..  ...|||.||...|:..:||:.|.:|....:....   :|:.:|..||..|..|.
  Rat   435 GHGTEIITG--SGLNDGLWHFVSINARRNRVTLTLDNDAASLPPDISWLQIYSGNSYYFGGCPDN 497

  Fly   502 ----------NGFVGCMRLISVDGNYKLPQDWVKGEEVCCGD--DVVVDACQMIDRCNPNPCQHK 554
                      ..|.||||||.:|..   |:|.:..::...|:  |:.:|.|.:.|||.||.|:|.
  Rat   498 LTDSQCLNPIKAFQGCMRLIFIDNQ---PKDLISVQQGSLGNFSDLHIDLCSIKDRCLPNYCEHG 559

  Fly   555 GLCHQNSREFFCDCGHTGYAGAVCHTSNNPLSCLALKNVQHVQQRVN-----LNLDVDGSGPLEP 614
            |.|.|....|:|:|.:|||.||.||.|....||      :..:.|.|     ..:|.||||||||
  Rat   560 GHCVQTWTTFYCNCSNTGYTGATCHDSIYEQSC------EVYRHRGNNTSGFFFVDSDGSGPLEP 618

  Fly   615 FPVTCEFYSDGRVITTLSHSQEHTTTVDGFQEPGSFEQSIMYDANQLQIEALLNRSHSCWQRLSY 679
            ..:.|....| ::..|:.|:....|.|.|......:..::.|..:..|:.||::.|..|.|.::|
  Rat   619 LQLYCNITED-KIWMTIQHNITELTQVQGSNAEKPYSMTLNYGGSMDQLVALIDGSEYCEQEVTY 682

  Fly   680 SCRSSRLFNSPSEAGNFRPFSWWISRHNQPMDYWAGALPGSRKCECGILGKCHDPTKWCNCDSNS 744
            .||.|||.|:|..|    ||:|||.|.|:...||.|::||.:||.||:...|.|...:||||:::
  Rat   683 HCRRSRLLNTPDGA----PFTWWIGRSNEKHHYWGGSVPGIQKCGCGLEQSCLDIGHFCNCDADT 743

  Fly   745 LEWMEDGGDIREKEYLPVRAVKFGDTGTPLDEKMGRYTLGPLRCEGDDLFSNVVTFRIADASINL 809
            .||..|.|.:..|::|||..:...||.....|...|  :|||||.||..|.|.|:|....:.::.
  Rat   744 DEWANDTGFLSFKDHLPVTQIIITDTNRSNSEAAWR--IGPLRCYGDRHFWNAVSFSTEASYLHF 806

  Fly   810 PPFDMGHSGDIYLEFRTTQENSVIFHATGPTDYIKLSLNGGNKLQFQYQAGSGPLGVNVGTSYHL 874
            |...:..|.||...|:||..:.|.....|..|:::|.|:..:::.|....|:||..:.|.:...|
  Rat   807 PTSHVEFSIDISFFFKTTALSGVFIENLGIKDFLRLELSSPSEVTFAIDVGNGPTELLVQSPSPL 871

  Fly   875 NDNNWHTVSVERNRKEARLVVDG--SIKAEVREPPGPVRALHLTSDLVIGATTEYRDGYVGCIRA 937
            |||.||.:..|||.||..|.||.  .|..|..| .|..: |.|.|.:.:|.|:..:.|::||||:
  Rat   872 NDNQWHYIQAERNLKETSLQVDNFPRIMRETTE-KGHFQ-LQLNSQMFVGGTSSRQKGFLGCIRS 934

  Fly   938 LLLNGKMVDLKEYSKRGLY--GISTGCVGRCES--NPCLNNGTCIERYDGYSCDCRWSAFKGPIC 998
            |.|||:.:||:|   ||:.  |:..||.|.|.|  |.|.|.|.|:|:::.|||||..|.::||.|
  Rat   935 LHLNGQNIDLEE---RGMVTSGVRPGCPGHCSSYGNNCHNGGKCVEKHNSYSCDCTKSPYEGPFC 996

  Fly   999 ADEIGVNLRSSSIIRYEFE--------------GSFRSTI--AENIRVGFTTTIPKGFL--LGFS 1045
            ..||.....|::.|.|.|:              ..:..|:  .|.|.:.|.|......|  |.||
  Rat   997 QKEISALFDSTTSITYMFQEPYPVSKNTSTSSSAIYTDTVLSKETILLSFVTAQAPTLLLYLNFS 1061

  Fly  1046 SNLTGEYLTIQISNSGHLRCVFDFGFERQEIIFPKKHFGLGQYH------------DMHFMRKN- 1097
               |..:|.:.:|.:|.|:.::              |...|:.|            .:|.::.| 
  Rat  1062 ---TPSFLALLLSRNGSLQILY--------------HLSKGESHMFTVSTENLANRRVHHVKMNR 1109

  Fly  1098 GGSTVVLKVDNYEPVEYNFDIKASADAQFNNIQYMYIGK-NESM----------TDGFVGCVSRV 1151
            .|:.:.:::|. :...|||.:    :|:|..::.:.:|| .|::          :.||:||:|.|
  Rat  1110 DGTELSIQMDQ-QLFSYNFPL----EAEFLTVRSLILGKVTETLGLDPRVARANSLGFIGCLSSV 1169

  Fly  1152 QFDDIYPLK--LMFQQNPPKNVKSLGTQLTEDFCG--VEPVTHPPIEIETRPPPL---VDEEKLR 1209
            |::.|.|||  |......|..|:.   .|.|..||  |:...:....:.:...|.   .|.:.|.
  Rat  1170 QYNHIAPLKAALRHASIAPATVQG---SLREFSCGSMVDSDVNAVTTVYSSSDPFGKTDDHDPLT 1231

  Fly  1210 KAYNEVDSVLLACLLVILFLLLILMFFLIG---RYLHRHKGDYLTHEDQGADGADDPD-----DA 1266
            .|.....:|:...:.|:.|    :.|.:||   |:|::||..:.|.:.:..:.:::.|     |.
  Rat  1232 NAVLSDSAVIGGVIAVVTF----ITFCVIGIMTRFLYQHKQSHCTSQKKEKEYSENLDSSFRHDI 1292

  Fly  1267 VLHSTTGHQVRKRTEIFI 1284
            .|.|||.   :.:.|.||
  Rat  1293 DLQSTTS---KCKREYFI 1307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-IVNP_524034.2 FA58C 46..185 CDD:214572 44/147 (30%)
FA58C 57..184 CDD:238014 40/135 (30%)
LamG 192..340 CDD:238058 49/154 (32%)
LamG 376..514 CDD:238058 50/153 (33%)
EGF 546..575 CDD:278437 14/28 (50%)
Laminin_G_2 824..943 CDD:280389 44/120 (37%)
EGF_CA 966..998 CDD:238011 16/33 (48%)
Laminin_G_2 1032..1156 CDD:280389 33/149 (22%)
4.1m 1239..1255 CDD:128590 6/18 (33%)
Cntnap5bXP_017454266.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 196 1.000 Domainoid score I3028
eggNOG 1 0.900 - - E1_KOG3516
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 603 1.000 Inparanoid score I905
OMA 1 1.010 - - QHG48725
OrthoDB 1 1.010 - - D171014at33208
OrthoFinder 1 1.000 - - FOG0000323
OrthoInspector 1 1.000 - - otm45876
orthoMCL 1 0.900 - - OOG6_101349
Panther 1 1.100 - - O PTHR15036
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X247
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

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