DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-IV and Nrxn3

DIOPT Version :9

Sequence 1:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_036013122.1 Gene:Nrxn3 / 18191 MGIID:1096389 Length:1584 Species:Mus musculus


Alignment Length:1171 Identity:269/1171 - (22%)
Similarity:465/1171 - (39%) Gaps:275/1171 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 FNGTGLVRYDLRREPITSTKESIRFRFKTAFANGVMMYSRGTQGDYYALQLKDNKMVLNLDLGSR 258
            |.|:..:.|||.:.||.|:.:.|...|||...||::::: |...||..|.|||..:.|.::|||.
Mouse   265 FRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHT-GKSADYVNLALKDGAVSLVINLGSG 328

  Fly   259 VMTSL--SVGSLLDDNVWHDVVISRNQRDIIFSVDRVI-VRGRIQGEFTRLNLNRELYLGGVPNV 320
            ...::  .|....:||.||||.::||.|.:..|||.:: ..|..|.::|.|..:...|:||.|:.
Mouse   329 AFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPST 393

  Fly   321 QE--GLIVQQNFSGCLENIYFNSTNFIRVMKDSTELGEGYLFTRVNTIYACPS-PPIYPVTFTTR 382
            .:  |..|..||.|||:.:.:.:.:....:.....:|:..:......::.|.: ..:.|:.|.|.
Mouse   394 ADLPGSPVSNNFMGCLKEVVYKNNDIRLELSRLARIGDTKMKIYGEVVFKCENVATLDPINFETP 458

  Fly   383 SSFVRLKGYENSQRLNVSFYFRTYEETGVMLH-H-----------------DFYS----GGYLKV 425
            .:::.|..:...:..::||.|||.|..|::|. |                 ||::    .|.|.:
Mouse   459 EAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYL 523

  Fly   426 FLEFGKVKIDLKVKDKARIILDNYDDQFNDGKWHSFVISIEKNRLILNIDQR--PMTTTKSMQV- 487
            .|:.|...|.:|...|          :.|||:|:...|..:.....::::.|  |.|.:...:: 
Mouse   524 LLDMGSGTIKVKATQK----------KANDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEIL 578

  Fly   488 -ATGAQYYIAGGKDKN-----------------GFVGCMRLISVDGNYKLPQDWVKGEEVCCGDD 534
             ..|..|  .||..:|                 |:|||:|.:.:||..|..:...:.:...    
Mouse   579 DLEGDMY--LGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAA---- 637

  Fly   535 VVVDACQMID--RCNPNPCQHKGLCHQNSREFFCDCGHTGYAGAVCHTSNNPLSC-------LAL 590
            .|..:|..:.  :|:..||::..:|......|.|||..|||.|..|....:.||.       :.:
Mouse   638 GVKSSCSRMSAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKVIM 702

  Fly   591 KNVQHVQQRVNLNLDVDGSGPLEPFPVTCEFYSD---GRVITTLSHSQEHTTTVDGFQEPGSFEQ 652
            ..|.|.                |...|:..|.|.   |.::.|.|.....|..::          
Mouse   703 PMVMHT----------------EAEDVSFRFMSQRAYGLLVATTSRDSADTLRLE---------- 741

  Fly   653 SIMYDANQLQIEALLNRSHSCWQRLSYSCRSSRLFNSPSE--AGNFRPFSWW----ISRHNQPM- 710
               .|..::::...|:    |   :..:|.||:   .|..  ||.....:.|    :.|..:.: 
Mouse   742 ---LDGGRVKLMVNLD----C---IRINCNSSK---GPETLYAGQKLNDNEWHTVRVVRRGKSLK 793

  Fly   711 -----DYWAGALPGSRKCECGILGKCHDPTKWCNCDSNSLEWME-DGGDIREKEYLPVRAVKFGD 769
                 |...|.:.|                     |...||:.. :.|.:.||.|:.|....|  
Mouse   794 LTVDDDVAEGTMVG---------------------DHTRLEFHNIETGIMTEKRYISVVPSSF-- 835

  Fly   770 TGTPLDEKMGRYTLGPLR------------CEGDD--------------LFSNVVTFRIADASIN 808
                         :|.|:            |:..|              :.::.|||:...:.:.
Mouse   836 -------------IGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTFKTKSSYLT 887

  Fly   809 LPPFDMGHSGDIYLEFRTTQ-ENSVIFHATGPTDYIKLSLNGGNKLQFQYQAGSGPLGVNVGTSY 872
            |.......|..::.:|:||. :..::|::....|:|.:.|..| .:.:.:..|:||..:...:..
Mouse   888 LATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFIAVELVKG-YIHYVFDLGNGPNVIKGNSDR 951

  Fly   873 HLNDNNWHTVSVERNRKEAR-LVVDGSIKAEVREPPGPVRALHLTSDLVIGATTE---------- 926
            .||||.||.|.:.|:..... |.||..:..:|   ....:.|.|..||.:....:          
Mouse   952 PLNDNQWHNVVITRDSSNTHSLKVDTKVVTQV---INGAKNLDLKGDLYMAGLAQGMYSNLPKLV 1013

  Fly   927 -YRDGYVGCIRALLLNGKMVDL----------------KEYSKRGLYGISTGCVGRCESNPCLNN 974
             .|||:.||:.::.|||::.||                ...:|..|.|.||    .|:.:.|.|.
Mouse  1014 ASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEVALTKADLQGPST----TCQEDSCANQ 1074

  Fly   975 GTCIERYDGYSCDCRWSAFKGPICADEIGVNL--RSSSIIRYEFEGSFR-STIAENIRVGFTTTI 1036
            |.|:::::|::|||..:::.|..|.|.....:  :|..:|.|.:..:.| ||.::.:.|||:||:
Mouse  1075 GVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPSTRSDRLAVGFSTTV 1139

  Fly  1037 PKGFLLGF-SSNLTGEYLTIQISNSGHLRCVFDFGFERQEIIFPKKHFGLGQYHDMHFMRKNGGS 1100
            ..|.|:.. |:...|::|.:.| ..|.:..||:.|.....|...:.....|:||.:.|.|..|.:
Mouse  1140 KDGILVRIDSAPGLGDFLQLHI-EQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTRNGGNA 1203

  Fly  1101 TVVLKVDNYE----------------------PVEYNFDI------KASADAQFNNIQYMYIGKN 1137
            |  |:|||:.                      |.:||..:      |......||....:.||..
Mouse  1204 T--LQVDNWPVNEHYPTGNTDNERLQMVKQKIPFKYNRPVEEWLQEKGRQLTIFNTQAQIAIGGK 1266

  Fly  1138 ESMTDG--FVGCVSRVQFDDIYPLKLMFQQNPPKNVKSLGT-QLTED---FCGVEPVTHPPIEIE 1196
            :.   |  |.|.:|.:.:|.:..|.:..:.||  |:|..|: :|..:   ..|....|..|.|:.
Mouse  1267 DK---GRLFQGQLSGLYYDGLKVLNMAAENNP--NIKINGSVRLVGEVPSVSGTTQTTSMPPEMS 1326

  Fly  1197 T 1197
            |
Mouse  1327 T 1327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-IVNP_524034.2 FA58C 46..185 CDD:214572
FA58C 57..184 CDD:238014
LamG 192..340 CDD:238058 53/150 (35%)
LamG 376..514 CDD:238058 40/180 (22%)
EGF 546..575 CDD:278437 11/28 (39%)
Laminin_G_2 824..943 CDD:280389 34/131 (26%)
EGF_CA 966..998 CDD:238011 10/31 (32%)
Laminin_G_2 1032..1156 CDD:280389 38/154 (25%)
4.1m 1239..1255 CDD:128590
Nrxn3XP_036013122.1 LamG 27..181 CDD:238058
EGF 202..231 CDD:394967
LamG 286..417 CDD:214598 45/131 (34%)
LamG 474..623 CDD:214598 37/160 (23%)
EGF_CA 651..684 CDD:238011 12/32 (38%)
LamG 712..846 CDD:214598 32/192 (17%)
Laminin_G_2 903..1031 CDD:396680 34/131 (26%)
LamG 1104..1283 CDD:238058 45/184 (24%)
Syndecan 1510..>1545 CDD:395821
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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