Sequence 1: | NP_524034.2 | Gene: | Nrx-IV / 39387 | FlyBaseID: | FBgn0013997 | Length: | 1284 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001249244.2 | Gene: | itx-1 / 171846 | WormBaseID: | WBGene00002174 | Length: | 1645 | Species: | Caenorhabditis elegans |
Alignment Length: | 1246 | Identity: | 270/1246 - (21%) |
---|---|---|---|
Similarity: | 448/1246 - (35%) | Gaps: | 353/1246 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 103 IATMGRMHTDEFVTEYI-VQYSDDGEFWRSYVNPTSEPQMFKGNSDGN----------SIHY-NV 155
Fly 156 FEVPIIAQWVRINPTRWHDRISMRVEL---YGCDYISENLYFN-GTGLVRYDLRREPITSTKESI 216
Fly 217 RFRFKTAFANGVMMYSRGTQGDYYALQLKDNKMVLNLDLGSRVMTSLSVGSLLDDNVWHDVVISR 281
Fly 282 NQRDIIFSVDRVIVRGRIQGEFTRLNLNRELYLGGVPNVQEGLIVQQNFSGC--LENIYFNSTNF 344
Fly 345 IRVMKDSTELGEGYLFTRVNTIYACPSPPIYPVTFTTR--------SSFVRLKGYE---NSQRLN 398
Fly 399 VSFYFRTYE-ETGVMLHHDFYSGGYLKVFLEFGKVKIDLKVKDKARIILD-----NYDDQFNDGK 457
Fly 458 WHSFVISI-------------------EKNRLILNIDQ--RPMTT----------TKSMQV---- 487
Fly 488 ------------ATGAQYYIAGGKDKNGFVGCMRLISVDGNYKL----PQDWVKGE--EVCCGDD 534
Fly 535 VV------------VDACQMIDRCNPNPCQHKGLCHQNSR-EFFCDCGHTGYAGAVCHTSNNPLS 586
Fly 587 CLALKNVQHVQQRVNLNLDVDGSGPLEPFPVTCEFYSDGRVITTLSHSQEHTTTVDGFQEPGSFE 651
Fly 652 QSIMY-----------DANQLQIEALLNRSHSCWQRLSYSCRSSRLFNSPSEAGNFRPFSWW--- 702
Fly 703 ISRHNQPMDYWAGALPGSRKCECGILGKCHDPTKWCNCDSNSLEWMEDGGDIREKEYLPVRAVKF 767
Fly 768 GDTGTPLDEK--MGRYTLGPLRCEGDD-----LFSNVVTFRIADASINLPPFDMGHSGDIYLEFR 825
Fly 826 TTQENSVIFHATGPTDY----IKLSLNGGNKLQF-QYQAGSGPLGVNVGTSYHLNDNNWHTVSVE 885
Fly 886 RNRKEARLVVDGSIKAEVREPPGPVRALH----------LTSDLVIGATTEYRDGYVGCIRALLL 940
Fly 941 NGKMVDLKEYSKRG-LYGISTGCVGRCESNPCLNNGTCIERY-DGYS-CDCRW-SAFKGPICADE 1001
Fly 1002 IGVNLRSSSIIRYEFEGSF------RSTIAENIRVGFTTTIPKGFLLGFSSNLTGEYLTIQISNS 1060
Fly 1061 GHLRCVFDFGFERQEIIF-------PKKHFGLGQYHDMHFMR---KNGGSTVVLKVDNYE----- 1110
Fly 1111 -------PVE-----YNFD-----IKASADAQFNNIQYMYIG--KNESMTDG----FVGCVSRVQ 1152
Fly 1153 FDDIYPLKLMF 1163 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Nrx-IV | NP_524034.2 | FA58C | 46..185 | CDD:214572 | 23/96 (24%) |
FA58C | 57..184 | CDD:238014 | 23/95 (24%) | ||
LamG | 192..340 | CDD:238058 | 28/150 (19%) | ||
LamG | 376..514 | CDD:238058 | 33/201 (16%) | ||
EGF | 546..575 | CDD:278437 | 11/29 (38%) | ||
Laminin_G_2 | 824..943 | CDD:280389 | 37/133 (28%) | ||
EGF_CA | 966..998 | CDD:238011 | 9/34 (26%) | ||
Laminin_G_2 | 1032..1156 | CDD:280389 | 27/161 (17%) | ||
4.1m | 1239..1255 | CDD:128590 | |||
itx-1 | NP_001249244.2 | LamG | 254..389 | CDD:238058 | 24/144 (17%) |
EGF | 481..507 | CDD:278437 | 11/26 (42%) | ||
LamG | 705..835 | CDD:238058 | 43/164 (26%) | ||
LamG | 905..1052 | CDD:238058 | 24/160 (15%) | ||
LamG | <1268..1364 | CDD:304605 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D171014at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR15036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 4.020 |