DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-IV and CNTNAP3C

DIOPT Version :9

Sequence 1:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_016870869.1 Gene:CNTNAP3C / 100289279 HGNCID:53878 Length:514 Species:Homo sapiens


Alignment Length:489 Identity:152/489 - (31%)
Similarity:258/489 - (52%) Gaps:59/489 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 DCNQPL---MERAVLTATSSL-TERGPDKARLN---GNAAWTPVENTYNHFLTLDLGDPRMVRKI 103
            ||:.||   :.|:..:::|.| :..||..:|||   |...|||:.:....:|.:|||:...|..:
Human    30 DCDAPLASALPRSSFSSSSELSSSHGPGFSRLNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAV 94

  Fly   104 ATMGRMHTDEFVTEYIVQYSDDGEFWRSYVNPTSEPQM--FKGNSDGNS-IHYNVFEVPIIAQWV 165
            ||.|...:.::||.|::.:||.|..|:.|   ..|..:  |.||::.:| :||.: :.|..|:::
Human    95 ATQGGYGSSDWVTSYLLMFSDGGRNWKQY---RREESIWGFPGNTNADSVVHYRL-QPPFEARFL 155

  Fly   166 RINPTRWH--DRISMRVELYGCDYISENLYFNGTGLVRYDLRREPITSTKESIRFRFKTAFANGV 228
            |..|..|:  .||.||:|:|||.|.||.:||:|...:.|.|.::|:...::.|..:||...:||:
Human   156 RFLPLAWNPRGRIGMRIEVYGCAYKSEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGI 220

  Fly   229 MMYSRGTQGDYYALQLKDNKMVLNLDLGSRVMTS------LSVGSLLDDNVWHDVVISRNQRDII 287
            :::..|..|::..|:|...|:|..|:.|:..:.|      |::||||||..||.|:|......:.
Human   221 LLHREGQHGNHITLELIKGKLVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVN 285

  Fly   288 FSVDRVIVRGRIQGEFTRLNLNRELYLGGVPNV-QEGLIVQQNFSGCLENIYFNSTNFIRVMKDS 351
            |:||:.....:.:|:.:.|:||.|:..||:|.. :.....:::|.|||||:|:|..       |.
Human   286 FTVDKHTHHFQAKGDSSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGV-------DV 343

  Fly   352 TELGEGY---LFTRVNTIYACPSPPIYPVTFTTRSSFVRLKGYENSQRLNVSFYFRTYEETGVML 413
            |||.:.:   :....|..::||.|...||||.:..|::.|.|.....:::|:|.|||:...|.:|
Human   344 TELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLL 408

  Fly   414 HHDFYSG-GYLKVFLEFGKVKIDL--------KVKDKARIILDNYDDQFNDGKWHSFVISIEKNR 469
            ..:...| |...:||:.||:|:.|        .|...|.:         |||:|||...|.:.:.
Human   409 FGELRRGSGSFVLFLKDGKLKLSLFQPGQSPRNVTAGAGL---------NDGQWHSVSFSAKWSH 464

  Fly   470 LILNIDQ----RPMTTTKSMQVATGAQYYIAGGK 499
            :.:.:|.    :|:.   ::.:.:|..||. |||
Human   465 MNVVVDDDTAVQPLV---AVLIDSGDTYYF-GGK 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-IVNP_524034.2 FA58C 46..185 CDD:214572 50/150 (33%)
FA58C 57..184 CDD:238014 44/135 (33%)
LamG 192..340 CDD:238058 49/154 (32%)
LamG 376..514 CDD:238058 39/137 (28%)
EGF 546..575 CDD:278437
Laminin_G_2 824..943 CDD:280389
EGF_CA 966..998 CDD:238011
Laminin_G_2 1032..1156 CDD:280389
4.1m 1239..1255 CDD:128590
CNTNAP3CXP_016870869.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6825
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000323
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101349
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.810

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