DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nrx-IV and rs1

DIOPT Version :10

Sequence 1:NP_524034.2 Gene:Nrx-IV / 39387 FlyBaseID:FBgn0013997 Length:1284 Species:Drosophila melanogaster
Sequence 2:XP_012811745.2 Gene:rs1 / 100124900 XenbaseID:XB-GENE-5848874 Length:247 Species:Xenopus tropicalis


Alignment Length:154 Identity:49/154 - (31%)
Similarity:77/154 - (50%) Gaps:25/154 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 DAFTDYFSDYDCNQPLMERAVLTATSSLTERGPDKARLNG---NAAWTPVENTYNHFLTLDLGDP 97
            :.:|.::|.:..|                     ||||||   ..||.........::.:||.:.
 Frog   110 EQYTGWYSSWTAN---------------------KARLNGQGFGCAWLSKFQDNGQWIQIDLKEI 153

  Fly    98 RMVRKIATMGRMHTDEFVTEYIVQY-SDDGEFWRSYVNPTSEPQMFKGNSDGNSIHYNVFEVPII 161
            :::..|.|.||...||::|:|.||| :||...|..|.:.|...::|.||||.:|...|....||:
 Frog   154 KVISGIMTQGRCDVDEWMTKYSVQYKTDDSLNWVYYKDQTGNNRVFYGNSDRSSTVQNFLRPPIV 218

  Fly   162 AQWVRINPTRWHDRISMRVELYGC 185
            |:::|:.|..||.||::|:||..|
 Frog   219 ARYIRLLPLGWHVRIAVRMELLEC 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nrx-IVNP_524034.2 FA58C 57..184 CDD:238014 45/130 (35%)
LamG 192..340 CDD:238058
LamG 376..514 CDD:238058
EGF 546..575 CDD:394967
LamG 819..943 CDD:214598
EGF_CA 966..998 CDD:238011
Laminin_G_2 1032..1156 CDD:460494
4.1m 1239..1255 CDD:128590
rs1XP_012811745.2 FA58C 91..240 CDD:238014 47/150 (31%)
Blue background indicates that the domain is not in the aligned region.

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