DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF3l and eif3s6ip

DIOPT Version :9

Sequence 1:NP_648553.1 Gene:eIF3l / 39386 FlyBaseID:FBgn0036258 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_998293.1 Gene:eif3s6ip / 406402 ZFINID:ZDB-GENE-040426-2138 Length:576 Species:Danio rerio


Alignment Length:557 Identity:302/557 - (54%)
Similarity:402/557 - (72%) Gaps:34/557 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DEYATNSDYYDDYAHTGDPQLDMEYERNYYAAR----MPDNVKYFLINFCQAIK----------- 54
            |.|:..:||  || |||||:.|:.|||.|...:    :|:.:|.||..|.:.|.           
Zfish    13 DPYSYPNDY--DY-HTGDPKADLAYERQYEHQQTYHVIPEVIKNFLQYFHKTISDLIDQKVYELQ 74

  Fly    55 ---------EGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHI 110
                     |..:|:||::|||::.:::|..|..:.|||.:.:|::|.||.||||||||||||||
Zfish    75 ANRVSSESIEQKIYEIQDVYENSWNKLTDRFFKTSPWPEAEAIASLVGNDAVFLILYKELYYRHI 139

  Fly   111 HARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLT 175
            :|::.|||.|:||..|::|||:.||.|::|..|..||||:.|||:::|||:||||:|:|||.:..
Zfish   140 YAKVSGGPTLDQRFESYYNYCNLFNYILNADGPAPLELPNQWLWDIIDEFIYQFQSFSQYRCKTA 204

  Fly   176 EKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNIKKQLEAISQGVDPQTVAGDFGKLSFYKML 240
            :||::||:.| .|:...|::..:|||||||||.|||.:|||..:.|.||::|||::|:.|.||||
Zfish   205 KKSEEEIEFL-RNNPKIWNVHSVLNVLHSLVDKSNINRQLEVYTSGGDPESVAGEYGRHSLYKML 268

  Fly   241 GYFSLVGLLRVHSLLGDYYQAIKVLEPIEIHKKSAYSHIPACQISTSYYVGFAYMMMRRYADAIR 305
            ||||||||||:|||||||||||||||.||::|||.||.:|.|||:|.|||||||:|||||.||||
Zfish   269 GYFSLVGLLRLHSLLGDYYQAIKVLENIELNKKSMYSRVPECQITTYYYVGFAYLMMRRYQDAIR 333

  Fly   306 TFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREKNYHDAM 370
            .|::||||||||:.::...:|:.:.||||.|||:.||||.|.::|..|||||...|||| |.|.|
Zfish   334 VFANILLYIQRTRNMFQRTTYKYEMINKQNEQMHGLLAIALTMYPMRIDESIHTQLREK-YGDKM 397

  Fly   371 FKMQCGDLEVFKSFFVFACPRFVSPCPPAVDAPMDDYVKDPMEHQLQVFMDEVRQQKDLPTTRSY 435
            .:||.|||:||:..|.||||:|:||..|..:....:|.|:|.:.||:||.:||:||..|.|.||:
Zfish   398 LRMQKGDLQVFEELFSFACPKFLSPVVPNYENVHPNYHKEPFQQQLKVFAEEVQQQAQLSTIRSF 462

  Fly   436 LKLYTTLPLTKLASFIDPNASEDDVSKLLIRLLCFKHKMRNLVWSKGPSGLEGTFKSGSELDFYI 500
            ||||||:|:.|||.|:|.:..|     ..|:||.|||||:||||:.|.|.|:|.|:|.||:||||
Zfish   463 LKLYTTMPVAKLAGFLDMSEQE-----FRIQLLVFKHKMKNLVWTSGISALDGEFQSASEVDFYI 522

  Fly   501 DDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNI 537
            |.||||||||||:.||||||:|:|.||.:|||.||.:
Zfish   523 DKDMIHIADTKVARRYGDFFIRQIHKFEELNRTLKKM 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3lNP_648553.1 Paf67 122..527 CDD:287257 238/404 (59%)
eif3s6ipNP_998293.1 Paf67 151..549 CDD:287257 238/404 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584212
Domainoid 1 1.000 490 1.000 Domainoid score I363
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9380
Inparanoid 1 1.050 600 1.000 Inparanoid score I920
OMA 1 1.010 - - QHG53715
OrthoDB 1 1.010 - - D393910at2759
OrthoFinder 1 1.000 - - FOG0006510
OrthoInspector 1 1.000 - - oto41454
orthoMCL 1 0.900 - - OOG6_102359
Panther 1 1.100 - - LDO PTHR13242
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2511
SonicParanoid 1 1.000 - - X4745
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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