DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3l and eif3l

DIOPT Version :9

Sequence 1:NP_648553.1 Gene:eIF3l / 39386 FlyBaseID:FBgn0036258 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_988980.1 Gene:eif3l / 394577 XenbaseID:XB-GENE-493733 Length:562 Species:Xenopus tropicalis


Alignment Length:567 Identity:299/567 - (52%)
Similarity:401/567 - (70%) Gaps:40/567 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 YGGDEYATNSDYYD---DY-AHTGDPQLDMEYERNY----YAARMPDNVKYFLINFCQAIK---- 54
            |..:|:..:.|.|:   || .|||||:.|:.|||.|    |.. :|:.:|.|:..|.:.:.    
 Frog     3 YANEEFEGSYDPYNYQADYDMHTGDPKQDLAYERQYEQQTYQV-IPEVIKNFIQYFHKTVSDLID 66

  Fly    55 ----------------EGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYK 103
                            :..:|:||::|||::.::::..|..:.|||.:.:|..|.||.|||||||
 Frog    67 QKVYELQASRVSSDVIDQKVYEIQDIYENSWTKLTERFFKNSPWPEAEAIAPQVGNDAVFLILYK 131

  Fly   104 ELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFA 168
            |||||||:|::.|||.||||..|::|||:.||.|::|..|..||||:.|||:::|||:||||:|:
 Frog   132 ELYYRHIYAKVSGGPTLEQRFESYYNYCNLFNYILNADGPAPLELPNQWLWDIIDEFIYQFQSFS 196

  Fly   169 QYRARLTEKSQDEIQQLCVNHSNE--WSILCILNVLHSLVDISNIKKQLEAISQGVDPQTVAGDF 231
            |||.:..:||::||:.|   .||.  |::..:|||||||||.|||.:|||..:.|.||::|||::
 Frog   197 QYRCKTAKKSEEEIEFL---RSNPKIWNVHSVLNVLHSLVDKSNINRQLEVYTSGGDPESVAGEY 258

  Fly   232 GKLSFYKMLGYFSLVGLLRVHSLLGDYYQAIKVLEPIEIHKKSAYSHIPACQISTSYYVGFAYMM 296
            |:.|.||||||||||||||:|||||||||||||||.||::|||.||.:|.||::|.|||||||:|
 Frog   259 GRHSLYKMLGYFSLVGLLRLHSLLGDYYQAIKVLENIELNKKSMYSRVPECQVTTYYYVGFAYLM 323

  Fly   297 MRRYADAIRTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVL 361
            ||||.||||.|::|||||||||.::...:|:.:.||||.|||:.||||.|.::|..|||||...|
 Frog   324 MRRYQDAIRVFANILLYIQRTKSMFQRTTYKYEMINKQNEQMHGLLAIALTMYPMRIDESIHTQL 388

  Fly   362 REKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAVDAPMDDYVKDPMEHQLQVFMDEVRQQ 426
            ||| |.|.|.:||.||.::::..|.:|||:|:||..|..|....:|.|:|...||:||:|||:||
 Frog   389 REK-YGDKMLRMQKGDAQIYEELFNYACPKFLSPVVPNYDNVHPNYHKEPYLQQLKVFLDEVQQQ 452

  Fly   427 KDLPTTRSYLKLYTTLPLTKLASFIDPNASEDDVSKLLIRLLCFKHKMRNLVWSKGPSGLEGTFK 491
            ..|.|.||:||||||:|:.|||.|:|....|     ..|:||.|||||:||||:.|.|.|||.|:
 Frog   453 AQLSTIRSFLKLYTTMPVAKLAGFLDLPEQE-----FRIQLLVFKHKMKNLVWTSGISALEGEFQ 512

  Fly   492 SGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKNIN 538
            |.||:|||||.||||||||||:.||||||:|:|.||.:||:.||.::
 Frog   513 SASEVDFYIDKDMIHIADTKVARRYGDFFIRQIHKFEELNKTLKKMS 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3lNP_648553.1 Paf67 122..527 CDD:287257 238/406 (59%)
eif3lNP_988980.1 Paf67 153..548 CDD:370925 236/403 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 486 1.000 Domainoid score I391
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9380
Inparanoid 1 1.050 589 1.000 Inparanoid score I977
OMA 1 1.010 - - QHG53715
OrthoDB 1 1.010 - - D393910at2759
OrthoFinder 1 1.000 - - FOG0006510
OrthoInspector 1 1.000 - - oto102369
Panther 1 1.100 - - LDO PTHR13242
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2511
SonicParanoid 1 1.000 - - X4745
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1313.110

Return to query results.
Submit another query.