DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment eIF3l and C03H5.5

DIOPT Version :9

Sequence 1:NP_648553.1 Gene:eIF3l / 39386 FlyBaseID:FBgn0036258 Length:539 Species:Drosophila melanogaster
Sequence 2:NP_493721.2 Gene:C03H5.5 / 182182 WormBaseID:WBGene00015407 Length:552 Species:Caenorhabditis elegans


Alignment Length:539 Identity:119/539 - (22%)
Similarity:209/539 - (38%) Gaps:128/539 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DNVKYFLINFCQAIKEGNLYDIQNMYENTFPQISDHHFDKTAWPEEQEV-AAIVDNDKVFLILYK 103
            |.|..:|.:|.:.|.|.||.:|||.|.:....:.........||:|..| .:|...::.|::|||
 Worm    96 DIVLEYLAHFSKMIAENNLLEIQNCYYDRLETVQKQLPPSFTWPDEITVRKSISPENQDFMVLYK 160

  Fly   104 ELYYRHIHARIPGGPKLEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFA 168
            ||.||.::|      :..|..:...||...|:::     |..|.|||.|:.::::|:|:|.|...
 Worm   161 ELKYRRLNA------EARQNKDMLENYQSIFSIL-----PGKLNLPDYWILDIMEEYVFQIQTSI 214

  Fly   169 QYRARLTEKSQDEIQQLCVNHSNEWSILCILNVLHSLVDISNIKKQLEAISQGVDPQTVAGDFGK 233
            .....::.|.                  ..||.|.||.      .|.||                
 Worm   215 ISTESVSNKD------------------AALNTLISLA------SQPEA---------------- 239

  Fly   234 LSFYKMLGYFSLVGLLRVHSLLGDYYQAIKVLE--PIEIHKKSAYSHIPACQISTSYYVGFAYMM 296
                 .|...||:||:|:|..|.|:....::|:  |.||.....       .|..:|.:||||::
 Worm   240 -----NLKTLSLLGLIRMHIFLQDHQSTSQILDQMPPEIQGTET-------MIRVTYQIGFAYLI 292

  Fly   297 MRRYADAIRTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQV- 360
            :.|:|:::..|..:|                 ....:|||: :.:.|:..:.:  ||..|.::: 
 Worm   293 IGRFAESVDRFLKVL-----------------SSSVEQAEK-FKINALPCIAY--CISNSSKELE 337

  Fly   361 -------LREKNYHDAMFKMQCGDLEVFKSFFVFACPRFVSPCPPAVDAPMDDYVKDPMEHQLQV 418
                   ..|..|.:.|...:...:|.|.|||. .|..|:...|.  :..:..:.|......:..
 Worm   338 IPSEISKHVESTYPNQMKDWKEAKIETFLSFFA-ECSSFIPQLPR--NNKLSLHWKSQNLKSMVF 399

  Fly   419 FMDEVRQQKDLPTTRSYLKLYTTLPLTKLASFIDPNASEDDV------SKLLIRLLCFKHKMRNL 477
            ::..|...|.|...:..||:...|||...|:.:.|.::..|:      ...|.||:..|......
 Worm   400 YLQRVTTWKPLRNLKGLLKICPVLPLEARATSLLPVSTSSDIDYFCQYDSFLNRLVTVKPSKLTK 464

  Fly   478 VWSKGPSG---------------LEGTFKSGSELDFYIDD---DMIHI-----ADTKVSHRYGDF 519
            ::...|..               :..|.:..:::|..|.|   ..|.:     .:.|:.......
 Worm   465 IFQDFPDANRQKTLVFLIMKYHKILQTVQKSAKIDEKIADFGRKFIGVLGKAHKNLKIDQEDAMC 529

  Fly   520 FVRKILK--FNDLNRKLKN 536
            ::|::.|  .:|.||.::|
 Worm   530 YMREVAKISMDDANRFVEN 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF3lNP_648553.1 Paf67 122..527 CDD:287257 89/445 (20%)
C03H5.5NP_493721.2 Paf67 179..>307 CDD:287257 44/184 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160161292
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3677
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D393910at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13242
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

Return to query results.
Submit another query.