DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP68F and BEM3

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_015210.1 Gene:BEM3 / 855988 SGDID:S000006036 Length:1128 Species:Saccharomyces cerevisiae


Alignment Length:410 Identity:105/410 - (25%)
Similarity:154/410 - (37%) Gaps:119/410 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 FEDQL-REQSENFQTPRNKCDFLGTDKQGRHIFGIYASRFP----EKSQLEGFVREIIKEI--EP 149
            |.|.: ..||.:..:.||..|   ||.......|.:.|:|.    ..:....:|.::.:|.  ..
Yeast   736 FSDYIDPSQSLSLSSSRNAND---TDSASHLSAGTHHSKFGNATISATDTPSYVTDLTQEYNNNN 797

  Fly   150 FVENDYILVYFHQGLKEDNKPS--AQFL----WNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNF 208
            .:.|....:....|:  |:.||  :.||    .|:.:|.|.. |..:::|:              
Yeast   798 NISNSSNNIANSDGI--DSNPSSHSNFLASSSGNAEEEKDSR-RAKMRSLF-------------- 845

  Fly   209 FSPFISDKFRKKLVYISSLDELRQALGLNKLKL-----------PDNICDLDDKLNPSRKPSTPP 262
              ||      |||.        ..|..:|.:.:           ||:|..     :||:|.....
Yeast   846 --PF------KKLT--------GPASAMNHIGITISNDSDSPTSPDSIIK-----SPSKKLMEVS 889

  Fly   263 PSSNINASRQQQHKMATTHQFGVPLKFIVMNSPCLN----------SIPPIVRKCVDSLSITGVI 317
            .|||   |....|  .:|..||..|:      .||.          .:|.:|.:|::.|.....|
Yeast   890 SSSN---SSTGPH--VSTAIFGSSLE------TCLRLSSHKYQNVYDLPSVVYRCLEYLYKNRGI 943

  Fly   318 DTEGIFRRSGNHSEIMALKERVNRGEDVDLKSVN-----------------VHVIAGLLKSFLRD 365
            ..|||||.||:.:.|..|:||.::..||||...|                 |:.::||||.:||.
Yeast   944 QEEGIFRLSGSSTVIKTLQERFDKEYDVDLCRYNESIEAKDDEASPSLYIGVNTVSGLLKLYLRK 1008

  Fly   366 LAEPLLTFELYEDVTGFLDWPK--EERSRNVTQ-------LIREKL-PEENYELFKYIVEFLVRV 420
            |...|...|      .||.:.:  :|...|..|       ||...| |..|..|...:.|.|||:
Yeast  1009 LPHLLFGDE------QFLSFKRVVDENHNNPVQISLGFKELIESGLVPHANLSLMYALFELLVRI 1067

  Fly   421 MDCEDLNKMTSSNLAIVFGP 440
            .:....|||...||.|||.|
Yeast  1068 NENSKFNKMNLRNLCIVFSP 1087

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 24/145 (17%)
RhoGAP-p50rhoGAP 278..473 CDD:239869 61/200 (31%)
BEM3NP_015210.1 PX 520..622 CDD:214610
PH_Bem3 633..741 CDD:270096 2/4 (50%)
RhoGAP 904..1110 CDD:470621 60/196 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.