DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and arhgap12a

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_021336423.1 Gene:arhgap12a / 563267 ZFINID:ZDB-GENE-050809-38 Length:853 Species:Danio rerio


Alignment Length:534 Identity:118/534 - (22%)
Similarity:199/534 - (37%) Gaps:126/534 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SRFAPRLPVIVCQLYRNRPAINPIVDNSDEPQPSLSDLHDFEPKLEFDDTELLAPSPLEK----- 64
            ||....||.|..:...|...:.|            .|||    |....|..|..|.|:.:     
Zfish   360 SRSEWELPKIGLKSQSNHTPLMP------------GDLH----KTRSLDRRLPDPIPISRTQRHS 408

  Fly    65 -------DVMVGDFVLAEDPELEPE-----------EDVNPLEDDFEDQLREQSENFQTPRNKCD 111
                   |.:...||......|...           :|......|.:.......:...:|..||.
Zfish   409 IYSHETNDKLKQKFVKVRQSFLPRRKTTLRSHPYFPQDTKTGSPDSDSSCPSSPKPPHSPSEKCA 473

  Fly   112 FLGTDK---QGRHIFGIYASRFPEKSQLEGFVREIIKEIEPFVENDYILVYFHQG-------LKE 166
            .|...|   .|:.:...:.|.:   :.|:|                 .|:.|::|       ...
Zfish   474 TLNMTKITEHGKKVRKNWTSYW---TVLQG-----------------SLLIFNKGQGGGSGWFGR 518

  Fly   167 DNKPSAQFL---------WNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKL- 221
            |.|.|.::.         |.|   .|::.:|::..|.....|   .::....|..:.:.:.|.| 
Zfish   519 DQKSSVEYSVDLKGGSVDWAS---KDKSSKKHVLELKTRQGT---ELLLQSDSDGLVNDWHKALT 577

  Fly   222 ----VYISSLDELRQALGLNKLKLPDN-ICDLD-DKLNPSRKPSTPPPSSNINASRQQQHKMAT- 279
                .|:...||   |:..:..:.|:| ..|.: |:.|..:.......:|..||.:::::|:.. 
Zfish   578 EAIHTYMWESDE---AIEEDMPESPENEKHDKEKDRKNSKKARDIKKTASMDNAEQKKKNKLVVL 639

  Fly   280 -----THQ------------FGVPLKFIVMNSPCLNSIPPIVRKCVDSLSITGVIDTEGIFRRSG 327
                 |.|            ||..|..:.....  :::|..|..|::.:...| :..:|::|.||
Zfish   640 LLGRPTLQAVKDKGYIKDQVFGCSLSSLCQREN--STVPRFVWLCIEQVEKNG-LGVDGLYRVSG 701

  Fly   328 NHSEIMALKERVNRGEDVDL---KSVNVHVIAGLLKSFLRDLAEPLLTFELYEDVTGFLDWPKEE 389
            |.:.|..|:..||..|.:||   |..::||..|.||.|.|:|.|||.|:..:.|....:..|..:
Zfish   702 NLAIIQKLRFAVNHEEKIDLGDSKWEDIHVTTGALKMFFRELPEPLFTYTFFSDFISAIKMPDYK 766

  Fly   390 RSRNVTQLIREKLPEENYELFKYIVEFLVRVMDCEDLNKMTSSNLAIVFGPNFLWSRSTSTSLEE 454
            :.....:.:.:|||..|::..:.:.:.|.:|:...|.|:||:.::||||||..|        ..|
Zfish   767 QKVQTVKDLMKKLPRPNHDTIQVLFKHLKKVIQHVDENRMTTQSVAIVFGPTLL--------RPE 823

  Fly   455 IAPINAFVDFVLQN 468
            |...|..|..|.||
Zfish   824 IETANMAVHMVYQN 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 23/143 (16%)
RhoGAP-p50rhoGAP 278..473 CDD:239869 60/212 (28%)
arhgap12aXP_021336423.1 SH3_ARHGAP12 11..70 CDD:213003
SH3-WW_linker 67..233 CDD:435468
WW 252..278 CDD:459800
PRP40 253..>331 CDD:227435
PH_ARHGAP9-like 470..580 CDD:270053 23/135 (17%)
RhoGAP_ARHGAP27_15_12_9 660..846 CDD:239868 58/189 (31%)
Blue background indicates that the domain is not in the aligned region.

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