DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and arhgap17a

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001017592.3 Gene:arhgap17a / 550254 ZFINID:ZDB-GENE-050417-56 Length:847 Species:Danio rerio


Alignment Length:288 Identity:85/288 - (29%)
Similarity:140/288 - (48%) Gaps:50/288 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 IWNFFSPFISDKFRKKLVYI-SSLDELRQALGLNKLKLPDNICDLDDKLNPSRKPSTPPPSSNIN 268
            ::||||. .:|..|..::.: :..|..|::|.|.:..||                       ||.
Zfish   201 MYNFFSK-EADYARYYVMLLEAQADYHRKSLTLLESVLP-----------------------NIQ 241

  Fly   269 ASRQQQHKMATTHQFGVPLKFIVMNSPCLNSIPPIVRKCVDSLSITGVIDTEGIFRRSGNHSEIM 333
            |   ||...:....||..|...:..|....::|  :..||..|..||:.: ||:||.:...|::.
Zfish   242 A---QQDSWSEKPAFGTALDEHLKRSSREIALP--IEACVMMLLETGMKE-EGLFRIAAGASKLK 300

  Fly   334 ALKERVNRGEDVDLKSV-----NVHVIAGLLKSFLRDLAEPLLTFELYEDVTGFLDWPKEERSRN 393
            .||..:    |.....:     :.|.:||.|||:||:|.|||:|::||::.....:.|..::...
Zfish   301 KLKAAL----DCSTSQLEEFYSDPHAVAGALKSYLRELPEPLMTYQLYDEWIQASNVPDPDKRLQ 361

  Fly   394 VTQLIREKLPEENYELFKYIVEFLVRVMDCEDLNKMTSSNLAIVFGPNFLWSRSTSTSLEEIAP- 457
            ...:..::||:.|...|:|:|:||.::....|:||||.||:|||.|||.||:: |..||.|:|. 
Zfish   362 ALWVTCDQLPKNNKANFRYLVKFLAKLAQESDVNKMTPSNIAIVLGPNLLWAK-TEGSLAEMAAA 425

  Fly   458 ----INAFVDFVLQNHKDIYL---IDVN 478
                :...:|.::| |.|.:.   :|.|
Zfish   426 TSVHVVTIIDPIIQ-HADWFFPEDVDFN 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 10/37 (27%)
RhoGAP-p50rhoGAP 278..473 CDD:239869 66/204 (32%)
arhgap17aNP_001017592.3 None

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