DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and arhgap1

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001008141.1 Gene:arhgap1 / 493503 XenbaseID:XB-GENE-1015089 Length:435 Species:Xenopus tropicalis


Alignment Length:463 Identity:152/463 - (32%)
Similarity:239/463 - (51%) Gaps:66/463 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 LSDLHDFEPKLEFDDTELLAPSPLEKDVMVGDFVLAEDPELEPEEDVNPLEDDFEDQLREQSENF 103
            ||||:|   .|:.|:|..|                 :..:|...:|.|...||.:|.....:::.
 Frog     6 LSDLND---DLDKDETNQL-----------------DQLKLASLDDKNWPSDDVQDYPNNANDSK 50

  Fly   104 QTP-----------------RNKCDFLGTDKQGRHIFGIYASRFPEKSQLE--GFVREIIKEIEP 149
            .:|                 |...:..|.||.||.|....|.|.|...:::  ..::.:...::.
 Frog    51 PSPDPVTHLRWDDPYYDIAWRQIVEVAGDDKYGRKIVVFSACRLPPCHEIDHVKLLQYLKHTLDQ 115

  Fly   150 FVENDYILVYFHQGLKEDNKPSAQFLWNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFIS 214
            :||:||.|||.|.||..:||||..:|.::|:|.||.::||:|.||:||||.||:.:...|.|.||
 Frog   116 YVESDYTLVYLHHGLTSENKPSLGWLRDAYREFDRKYKKNIKALYIVHPTMFIKTLLILFKPIIS 180

  Fly   215 DKFRKKLVYISSLDELRQALGLNKLKLPDNICDLDDKLN-------PSRKPSTP-PPSSNINASR 271
            .||.:|:.|.:.|.:|.:.:.:.:|.:|..:...||.:.       .::||..| ||..|     
 Frog   181 FKFGRKIFYANYLSDLEEHMKVEQLGIPKQVLKYDDLIRSNLKTSAATQKPGPPRPPLPN----- 240

  Fly   272 QQQHKMATTHQFGVPLKFIVMNSPCLNSIPPIVRKCVDSLSITGVIDTEGIFRRSGNHSEIMALK 336
                     .|||:.|..:....|..:.||.:||..|..|. ...:.||||||||.....:..::
 Frog   241 ---------QQFGISLLHLKEKHPENDKIPLVVRDTVAFLQ-ENALSTEGIFRRSARTQIVREVQ 295

  Fly   337 ERVNRGEDVDLKSV-NVHVIAGLLKSFLRDLAEPLLTFELYEDVTGFLDWPKEERSRNVTQLIRE 400
            ::.|.|..|..:.. :||:.|.:||:|||:|.|||||:.||..|   :|:.|:|:....|..|.:
 Frog   296 QKYNMGVQVTFQQYDDVHLPAVILKTFLRELPEPLLTYNLYSFV---VDFSKQEQKIESTLQILQ 357

  Fly   401 KLPEENYELFKYIVEFLVRVMDCEDLNKMTSSNLAIVFGPNFLWSRSTSTSLEEIAPINAFVDFV 465
            .||:|||::.:::..|||.|....:.||||::|||:|||||.||.:..:.:|:.|.|||.|..|:
 Frog   358 TLPKENYDVLQFLTAFLVEVSSHNEQNKMTTTNLAVVFGPNLLWVKDAAMTLKAINPINTFTKFL 422

  Fly   466 LQNHKDIY 473
            |.|.::::
 Frog   423 LDNQRELF 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 47/124 (38%)
RhoGAP-p50rhoGAP 278..473 CDD:239869 76/195 (39%)
arhgap1NP_001008141.1 CRAL_TRIO_2 83..216 CDD:463965 48/132 (36%)
RhoGAP-p50rhoGAP 240..430 CDD:239869 77/207 (37%)

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