DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and chn1

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_998165.1 Gene:chn1 / 406273 ZFINID:ZDB-GENE-040426-1934 Length:459 Species:Danio rerio


Alignment Length:183 Identity:58/183 - (31%)
Similarity:95/183 - (51%) Gaps:18/183 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 PPIVRKCVDSLSITGVIDTEGIFRRSGNHSEIMALKERVNR-GEDVDLKSVNVH----VIAGLLK 360
            |.:|..|:..:...| :.:||::|.||....|..:|...:| ||..|: ||||:    ||:|.||
Zfish   282 PMVVDMCIREIEARG-LQSEGLYRISGFSDLIEDVKLSFDRDGEKADI-SVNVYEDINVISGALK 344

  Fly   361 SFLRDLAEPLLTFELYEDVTGFLDWPK----EERSRNVTQLIREKLPEENYELFKYIVEFLVRVM 421
            .:.|||..|::|::.|   ..|:...|    :||...:.:.:: .||..:.|..:|::..|.||.
Zfish   345 LYFRDLPIPVITYDAY---PRFIQAAKLTDPDERLEALHEALK-LLPPAHCETLRYLMAHLKRVT 405

  Fly   422 DCEDLNKMTSSNLAIVFGPNFLWS--RSTSTSLEEIAPINAFVDFVLQNHKDI 472
            ..|..|.|.:.||.|||||..:.:  ....|:|.:|......|:.:::| :||
Zfish   406 QNEKDNLMNAENLGIVFGPTLMRAPDLDAMTALNDIRYQRQVVELLIKN-EDI 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965
RhoGAP-p50rhoGAP 278..473 CDD:239869 58/183 (32%)
chn1NP_998165.1 SH2_a2chimerin_b2chimerin 42..128 CDD:198215
C1_alphaCHN 201..257 CDD:410406
RhoGAP_chimaerin 266..459 CDD:239837 58/183 (32%)
Blue background indicates that the domain is not in the aligned region.

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