DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and ralbp1

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_996963.1 Gene:ralbp1 / 404612 ZFINID:ZDB-GENE-040426-2098 Length:665 Species:Danio rerio


Alignment Length:306 Identity:73/306 - (23%)
Similarity:127/306 - (41%) Gaps:59/306 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 DKFRKK---------LVYISSLDE------LRQALGLNKLKLP--DNICDLDDKL---NPSRKPS 259
            :||:||         ....||.|:      ::::.|::..|.|  ....:.|.|:   .|..:.:
Zfish    74 NKFKKKEKRTEGYAAFQEDSSADDAESPSKMKRSKGIHVFKKPSFSKKKEKDFKVKEKGPKEEKA 138

  Fly   260 TPPPSSNINAS--------RQQQHKMATTHQ-------------FGVPLKFIVMNSPCLNSI--P 301
            ....|.::.|:        ::::.|.:|..:             ||..|...|..:...:.|  |
Zfish   139 KDKKSKDLTAADVVKQWKEKKKKKKPSTEPEPVITEVTVTFRPIFGASLVEAVRRTALYDGIQLP 203

  Fly   302 PIVRKCVDSLSITGVIDTEGIFRRSGNHSEIMALKERVNRGEDVDLKSVNVHVIAGLLKSFLRDL 366
            .|.|:|||.:...| :..|||:|.||..|::..||...:|.|...|:..:.|.:|.|||.:||:|
Zfish   204 AIFRECVDYIESYG-MKCEGIYRVSGMKSKVDELKAAYDREECPCLEEYDPHTVASLLKQYLREL 267

  Fly   367 AEPLLTFEL---YEDVTGFLDWPKEERSRNVTQLIREKLPEENYELFKYIVEFLVRVMDCEDLNK 428
            .:.||..||   :|:..|   .|.|.......|.:..::|..:..|..:::..:..|:..|...|
Zfish   268 PDNLLGKELSLRFEEACG---RPSEAEKLQEFQRLLTEVPAGSRLLLAWLITHMDHVIAREADTK 329

  Fly   429 MTSSNLAIVFGPNFLWSRSTSTSLEEIAPINAFVDFVLQNHKDIYL 474
            |...|::||..|....|...         :..|...|.:...|::|
Zfish   330 MNIQNISIVLNPTIQISNRV---------LYVFFTHVREMFGDVFL 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 9/41 (22%)
RhoGAP-p50rhoGAP 278..473 CDD:239869 56/212 (26%)
ralbp1NP_996963.1 RhoGap_RalBP1 183..364 CDD:239846 54/193 (28%)
Smc 393..>595 CDD:440809
Blue background indicates that the domain is not in the aligned region.

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