DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and bnip2

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001429093.1 Gene:bnip2 / 394197 ZFINID:ZDB-GENE-040109-6 Length:464 Species:Danio rerio


Alignment Length:260 Identity:64/260 - (24%)
Similarity:115/260 - (44%) Gaps:51/260 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NSDEPQPS-LSDLHDFEPKLEFDDTELLA------------PSPLEKDVMVGDFVLAEDPELEPE 82
            |.|..:.| |||..|...:|:.||.:..:            |.|...|::              .
Zfish   195 NLDHSEGSVLSDELDESTELDLDDIDTPSDNSNEFEWEDDLPKPKSADLL--------------R 245

  Fly    83 EDVNPLEDDFEDQLREQSENFQTPR-----NKCDFLGTDK------------QGRHIFGIYASRF 130
            :.|..:::....:.||:...::..|     ::.|....:.            .|.:...::|..|
Zfish   246 KGVESVQEYSTSEEREEGRRWRVFRIGDQEHRVDMKAIEPYKKVISHGGYYGDGLNAIIVFAVCF 310

  Fly   131 -PEKSQ------LEGFVREIIKEIEPFVENDYILVYFHQGLKEDNKPSAQFLWNSYKELDRNFRK 188
             ||.:|      ::...:.:|..:|..|..:|::||.:........||..:|...|:::||..||
Zfish   311 MPESNQPNYRYIMDNLFKYVIGTLELLVAENYMIVYLNGATSRRKMPSVGWLRKCYQQIDRRLRK 375

  Fly   189 NLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGLNKLKLPDNICDLDDKLN 253
            |||:|.:|||:||||.:.....||||.||.:|:.::.||.:|.:.:.:..:.:||.|...|::.|
Zfish   376 NLKSLIIVHPSWFIRTLLALTKPFISSKFSQKIKFVFSLTDLAELVPMEYVSIPDCIKQFDEEKN 440

  Fly   254  253
            Zfish   441  440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 41/129 (32%)
RhoGAP-p50rhoGAP 278..473 CDD:239869
bnip2NP_001429093.1 None
Blue background indicates that the domain is not in the aligned region.

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