DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and Bnipl

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_038958623.1 Gene:Bnipl / 361994 RGDID:1309478 Length:376 Species:Rattus norvegicus


Alignment Length:264 Identity:72/264 - (27%)
Similarity:108/264 - (40%) Gaps:47/264 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DNSDEPQPSLSDLHDFEPKLEFDDTELLAPSPLEKDVMVGDFVLAEDPELEPEEDVNPLE----- 89
            :|...|..|.|...|....||.|  ||..||..|:        |....|.|.|:|:...|     
  Rat   121 ENGASPSCSASSSSDASLDLEVD--ELETPSDSEQ--------LDSGHEFEWEDDLPRAEGLGAS 175

  Fly    90 ----------------DD------FEDQLREQSEN---FQTPRNKCDFLGTDKQGRHIFGIYASR 129
                            :|      |....|||..:   .:..|......|....|.:...::||.
  Rat   176 EAAERLGRGCVCDVAGEDGHRWRVFRTGRREQRVDMTIIEPYRKVLSHGGYHGDGLNAVILFASC 240

  Fly   130 FPEKSQ-------LEGFVREIIKEIEPFVENDYILVYFHQGLKEDNKPSAQFLWNSYKELDRNFR 187
            :..:|.       :|...|.::..:|..|..:|:||:...|......|...::...|..|||..|
  Rat   241 YLPRSSIPNYTYVMEHLFRYMVGTLELLVAENYLLVHLSGGTSRAQVPPLSWIRQCYHTLDRRLR 305

  Fly   188 KNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGLNKLKLPDNICDLDDKL 252
            |||:.|.|||.||:::.......||||.||.:|:.::.||.||.|.:.|.::.:|:.:..||..|
  Rat   306 KNLRALVVVHATWYVKAFLALVRPFISSKFTRKIRFLDSLGELAQLISLEQVHIPEAVRQLDQDL 370

  Fly   253 NPSR 256
            :.||
  Rat   371 HGSR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 40/129 (31%)
RhoGAP-p50rhoGAP 278..473 CDD:239869
BniplXP_038958623.1 BNIP2 102..230 CDD:463609 26/118 (22%)
CRAL_TRIO_2 232..369 CDD:463965 42/136 (31%)
Blue background indicates that the domain is not in the aligned region.

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