DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and Arhgap12

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001100827.2 Gene:Arhgap12 / 307016 RGDID:1310017 Length:838 Species:Rattus norvegicus


Alignment Length:428 Identity:101/428 - (23%)
Similarity:158/428 - (36%) Gaps:139/428 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FEPKLEFDDTELLAPSPLEKDVMVGDFVLAEDPELEPEEDVNPLEDDFEDQLREQSE--NFQTPR 107
            ||.|.. ..||||..|  :.|.::.|:             ...|.....:|:.|..|  ..:.| 
  Rat   535 FELKTR-QGTELLIQS--DNDAVINDW-------------FKVLSSTINNQVAEADEAAEEEAP- 582

  Fly   108 NKCDFLGTDKQGRHIFGIYASRFPEKSQLEGFVREIIKEIEPFVENDYILVYFHQGLKEDNKPSA 172
               |..|.:||.:           ||.|.|      :|::              :.:|..:..|:
  Rat   583 ---DSPGVEKQDK-----------EKDQKE------LKKL--------------RSMKGSSMDSS 613

  Fly   173 QFLWNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGLN 237
            :         .:..:||||......||  ::.:            |:| .||..     |..|.|
  Rat   614 E---------QKKTKKNLKKFLTRRPT--LQAV------------REK-GYIKD-----QVFGSN 649

  Fly   238 KLKLPDNICDLDDKLNPSRKPSTPPPSSNINASRQQQHKMATTHQFGVPLKFIVMNSPCLNSIPP 302
            ..    |:|..::                                               .::|.
  Rat   650 LA----NLCQREN-----------------------------------------------GTVPK 663

  Fly   303 IVRKCVDSLSITGVIDTEGIFRRSGNHSEIMALKERVNRGEDVDL---KSVNVHVIAGLLKSFLR 364
            .|:.|::.:...| :|.:||:|.|||.:.|..|:..||..|.:||   |..::|||.|.||.|.|
  Rat   664 FVKLCIEHVEEHG-LDVDGIYRVSGNLAVIQKLRFAVNHDEKLDLNDSKWEDIHVITGALKMFFR 727

  Fly   365 DLAEPLLTFELYEDVTGFLDWPKEERSRNVTQLIREKLPEENYELFKYIVEFLVRVMDCEDLNKM 429
            :|.|||.||..:.|....:.....:|...|..|||: ||:.|.:..:.:...|.||::..:.|:|
  Rat   728 ELPEPLFTFNHFNDFVNAIKQEPRQRVTAVKDLIRQ-LPKPNQDTMQILFRHLKRVIENGEKNRM 791

  Fly   430 TSSNLAIVFGPNFLW-SRSTSTSLEEIAPINAFVDFVL 466
            |..::||||||..|. .|.|..........|..|:.:|
  Rat   792 TYQSIAIVFGPTLLKPERETGNIAVHTVYQNQIVELIL 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 20/122 (16%)
RhoGAP-p50rhoGAP 278..473 CDD:239869 60/193 (31%)
Arhgap12NP_001100827.2 SH3_ARHGAP12 13..72 CDD:213003
SH3-WW_linker 69..264 CDD:435468
WW 266..296 CDD:238122
PH_ARHGAP9-like 457..568 CDD:270053 11/48 (23%)
RhoGAP_ARHGAP27_15_12_9 646..831 CDD:239868 64/237 (27%)
Blue background indicates that the domain is not in the aligned region.

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