DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and Arhgap24

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_038947751.1 Gene:Arhgap24 / 305156 RGDID:1306669 Length:785 Species:Rattus norvegicus


Alignment Length:186 Identity:59/186 - (31%)
Similarity:93/186 - (50%) Gaps:6/186 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 PPIVRKCVDSLSITGVIDTEGIFRRSGNHSEIMALKERVNRGEDVDLKS-VNVHVIAGLLKSFLR 364
            |.:|.:|||.:...| :..||:||..|..:.:..|::..:.||.....| .:||.:|.|||.:||
  Rat   189 PMLVEQCVDFIRQRG-LKEEGLFRLPGQANLVKELQDAFDCGEKPSFDSNTDVHTVASLLKLYLR 252

  Fly   365 DLAEPLLTFELYEDVTGFLDWPKEERSRNVTQLIRE--KLPEENYELFKYIVEFLVRVMDCEDLN 427
            :|.||::.:..|||.........:|....|.:|.::  .||..||.|.|||..||..|.....:|
  Rat   253 ELPEPVVPYAKYEDFLSCATLLSKEEEAGVKELTKQVKSLPVVNYNLLKYICRFLDEVQSYSGVN 317

  Fly   428 KMTSSNLAIVFGPNFLWSR--STSTSLEEIAPINAFVDFVLQNHKDIYLIDVNQRT 481
            ||::.|||.|||||.|..:  ...|.:|....:...:..::..|..::..|...::
  Rat   318 KMSAQNLATVFGPNILRPKVEDPLTIMEGTVVVQQLMSVMISKHDRLFPKDTEPQS 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965
RhoGAP-p50rhoGAP 278..473 CDD:239869 58/176 (33%)
Arhgap24XP_038947751.1 PH_RhoGap24 54..167 CDD:241530
RhoGAP_ARHGAP22_24_25 167..365 CDD:239855 58/176 (33%)
ERM_helical 689..>762 CDD:466641
Blue background indicates that the domain is not in the aligned region.

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