DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and Arhgap8

DIOPT Version :9

Sequence 1:NP_001261744.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001004242.1 Gene:Arhgap8 / 300115 RGDID:1303143 Length:425 Species:Rattus norvegicus


Alignment Length:366 Identity:144/366 - (39%)
Similarity:205/366 - (56%) Gaps:17/366 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 GTDKQGRHIFGIYASRFPEKSQL--EGFVREIIKEIEPFVENDYILVYFHQGLKEDNKPSAQFLW 167
            |.|:|||.||.....|.|...||  :..:..:...::..|||||.:||||.||...||||..:|.
  Rat    27 GDDRQGRRIFTFSCCRLPPLHQLNHQRLLEYLKYTLDQHVENDYTIVYFHYGLSSQNKPSLGWLQ 91

  Fly   168 NSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGLNKLKL 232
            |:|||.||.::||||.|||||||..|:.:||.|.|.||.||.||:.|.|:|.|||:.|..::|.:
  Rat    92 NAYKEFDRKYKKNLKALYVVHPTSLIKALWNIFKPLISHKFGKKVTYCSNLRELREHLQCDQLLI 156

  Fly   233 PDNICDLDDKLNPSRKPSTPPPSSNINASRQQQHKMATTHQFGVPLKFI-VMNSPCLNSIPPIVR 296
            |..:...|:||....|..|.||:..     ........|.||||.|::: ..|...|  |||::|
  Rat   157 PPEVVRYDEKLRNLHKGQTAPPTKT-----PPPRPPLPTQQFGVSLQYLRDKNQGEL--IPPVLR 214

  Fly   297 KCVDSLSITGVIDTEGIFRRSGNHSEIMALKERVNRGEDVDLKSV-NVHVIAGLLKSFLRDLAEP 360
            ..|..|...| :.|||:||||.:...:..::...::|:.|:.... ::|:.|.:||:|||:|.:|
  Rat   215 WTVTYLREKG-LHTEGLFRRSASAQTVRQVQRLYDQGKPVNFDDYGDMHLPAVILKTFLRELPQP 278

  Fly   361 LLTFELYEDVTGFLDWPKEERSRNVT--QLIREKLPEENYELFKYIVEFLVRVMDCEDLNKMTSS 423
            ||||:.||.:.|.   ...|.|..||  :||...|||.||.:.:|::.||..|......|||.||
  Rat   279 LLTFQAYEQILGI---TSVESSLRVTHCRLILRSLPEHNYAVLRYLMGFLHEVSLESISNKMNSS 340

  Fly   424 NLAIVFGPNFLWSRSTSTSLEEIAPINAFVDFVLQNHKDIY 464
            |||.|||.|.:|......||..:.|:|.|.:.:::.:..::
  Rat   341 NLACVFGLNLIWPSQGVASLSALVPLNLFTELLIEYYDKVF 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001261744.1 SEC14 105..233 CDD:238099 63/129 (49%)
RhoGAP-p50rhoGAP 269..464 CDD:239869 73/198 (37%)
Arhgap8NP_001004242.1 SEC14 12..157 CDD:238099 63/129 (49%)
RhoGAP 191..381 CDD:413382 72/195 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 123 1.000 Domainoid score I5448
eggNOG 1 0.900 - - E1_KOG4406
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 256 1.000 Inparanoid score I3085
OMA 1 1.010 - - QHG52084
OrthoDB 1 1.010 - - D1511935at2759
OrthoFinder 1 1.000 - - FOG0002972
OrthoInspector 1 1.000 - - otm45034
orthoMCL 1 0.900 - - OOG6_103505
Panther 1 1.100 - - O PTHR45808
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3319
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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