DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and Prune2

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001406496.1 Gene:Prune2 / 293823 RGDID:1311350 Length:3080 Species:Rattus norvegicus


Alignment Length:284 Identity:73/284 - (25%)
Similarity:121/284 - (42%) Gaps:72/284 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DNSDEPQPSLSDLHDFEPKLEFDDTELLAPS-PLEKDVMVGDFVLAEDPELEPEE-DVNPLEDDF 92
            |...||..|| ||:...|:    ..:|.||: .|..|...|. :|::|....|:| |:|..|.|.
  Rat  2761 DMRPEPPNSL-DLNGSHPR----RIKLTAPNINLSLDQSEGS-ILSDDNLDSPDEIDINVDELDT 2819

  Fly    93 EDQLREQSENFQTPRN-------------------------------KCDFLGTDKQ-------- 118
            .|    ::::|:.|.:                               :...:|..:|        
  Rat  2820 PD----EADSFEYPGHEDPMANRSSGQESESIPEYTAEEEREDNRLWRTVVIGEQEQRIDMKVIE 2880

  Fly   119 --------------GRHIFGIYASRF-PEKSQ------LEGFVREIIKEIEPFVENDYILVYFHQ 162
                          |.:...::|:.| |:.|:      :|.....:|..:|..|..||::||.:.
  Rat  2881 PYRRVISHGGYYGDGLNAIIVFAACFLPDSSRADYHYVMENLFLYVISTLELMVAEDYMIVYLNG 2945

  Fly   163 GLKEDNKPSAQFLWNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSL 227
            .......|...::...|:.:||..|||||:..:|||:||||.|.....||||.||..|:.|:|||
  Rat  2946 ATPRRKMPGLGWMKKCYQMIDRRLRKNLKSFIIVHPSWFIRTILAVTRPFISSKFSSKIKYVSSL 3010

  Fly   228 DELRQALGLNKLKLPDNICDLDDK 251
            .||...:.::.:.:|::|...|::
  Rat  3011 SELSGLIPMDCIHIPESIIKYDEE 3034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 43/129 (33%)
RhoGAP-p50rhoGAP 278..473 CDD:239869
Prune2NP_001406496.1 DHHA2 214..>277 CDD:460719
BNIP2 2778..2895 CDD:463609 19/125 (15%)
CRAL_TRIO_2 2897..3034 CDD:463965 45/136 (33%)
Blue background indicates that the domain is not in the aligned region.

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