DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP68F and LOC1276250

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:XP_061505465.1 Gene:LOC1276250 / 1276250 VectorBaseID:AGAMI1_014539 Length:616 Species:Anopheles gambiae


Alignment Length:312 Identity:77/312 - (24%)
Similarity:120/312 - (38%) Gaps:98/312 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AINPIVDNSDEPQPSLSDLHDFEPKLEFDDTELLAPS-------PLEKDVMVGDFVLAEDP---- 77
            |::.....||.|.|:...    :.:.:...::.::|.       ||..|::|.|....||.    
Mosquito   307 ALHASPPQSDGPSPTGGG----QQRKQKHPSKSISPRLHQRRKVPLPSDLLVDDVSSMEDTLSNQ 367

  Fly    78 ----------ELEPEEDV-------NPLEDDFED-----------------------------QL 96
                      .|.|...:       ..:::||.|                             ..
Mosquito   368 SVDELQQNLVSLSPSSSILDDNGFNVDIDEDFLDLPGTPKATGSSADAGHDAVLGRSSTLPQYSA 432

  Fly    97 REQSENFQTPRN----------------------KC--DFLGTDKQGRH--IFGIYASRFPEKSQ 135
            ||::.:.   ||                      ||  ...|..:.|.|  |....|...|::|:
Mosquito   433 REEARDI---RNWQKITLPDGKTREIDMKVIEPYKCVLSHGGYLQSGGHNAIVVFSACHLPDRSR 494

  Fly   136 ------LEGFVREIIKEIEPFVENDYILVYFHQGLKEDNKPSAQFLWNSYKELDRNFRKNLKTLY 194
                  :......::|.:|..|..||:|||.|.|....|.|...:|...|:.|||..||:|:.||
Mosquito   495 ADYHYVMNNLFLYVVKTLEQLVTEDYVLVYLHGGSSRGNVPPFPWLKKCYQLLDRRLRKSLRNLY 559

  Fly   195 VVHPT-WFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGLNKLKLPDNI 245
            :|||| |...|:| ...||||.||.:||||::||:||.:.:.:.|..:||.:
Mosquito   560 MVHPTFWLKSVVW-MARPFISSKFWRKLVYVTSLEELYKLVPVEKAAVPDKV 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 50/131 (38%)
RhoGAP-p50rhoGAP 278..473 CDD:239869
LOC1276250XP_061505465.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.