DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and CHN1

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001358443.1 Gene:CHN1 / 1123 HGNCID:1943 Length:476 Species:Homo sapiens


Alignment Length:187 Identity:57/187 - (30%)
Similarity:97/187 - (51%) Gaps:26/187 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   301 PPIVRKCVDSLSITGVIDTEGIFRRSGNHSEIMALKERVNR-GEDVDLKSVN----VHVIAGLLK 360
            |.:|..|:..:...| :::||::|.||....|..:|...:| ||..|: |||    :::|.|.||
Human   299 PMVVDMCIREIESRG-LNSEGLYRVSGFSDLIEDVKMAFDRDGEKADI-SVNMYEDINIITGALK 361

  Fly   361 SFLRDLAEPLLTFELYEDVTGFLDWPK----EERSRNVTQLIREKLPEENYELFKYIVEFLVRVM 421
            .:.|||..||:|::.|..   |::..|    :|:...:.:.:: .||..:.|..:|::..|.||.
Human   362 LYFRDLPIPLITYDAYPK---FIESAKIMDPDEQLETLHEALK-LLPPAHCETLRYLMAHLKRVT 422

  Fly   422 DCEDLNKMTSSNLAIVFGPNFLWSRSTSTSLEEIAPIN------AFVDFVLQNHKDI 472
            ..|..|.|.:.||.|||||..:    .|..|:.:|.:|      ..|:.:::| :||
Human   423 LHEKENLMNAENLGIVFGPTLM----RSPELDAMAALNDIRYQRLVVELLIKN-EDI 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965
RhoGAP-p50rhoGAP 278..473 CDD:239869 57/187 (30%)
CHN1NP_001358443.1 SH2 67..145 CDD:472789
C1_alphaCHN 218..274 CDD:410406
RhoGAP_chimaerin 283..476 CDD:239837 57/187 (30%)
Blue background indicates that the domain is not in the aligned region.

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