DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP68F and bnipl

DIOPT Version :10

Sequence 1:NP_001401037.1 Gene:RhoGAP68F / 39385 FlyBaseID:FBgn0036257 Length:485 Species:Drosophila melanogaster
Sequence 2:NP_001121866.1 Gene:bnipl / 100149386 ZFINID:ZDB-GENE-060503-81 Length:361 Species:Danio rerio


Alignment Length:277 Identity:78/277 - (28%)
Similarity:122/277 - (44%) Gaps:62/277 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PSLS---DLHDFEPKLEFDDTE--LLAPSP---LEKDVMVGDFVLAEDPEL----EPEEDVNPLE 89
            |:||   |....:..|:.|:.|  .|:|||   |:.|:.:.......|.|.    |...|:. .|
Zfish    86 PTLSLTLDKTSTDRSLKSDEFEASALSPSPDDDLDMDINLEALETPSDSESYNFPESMHDLE-WE 149

  Fly    90 DDF---------EDQLREQSENFQTPRNKCDFLGTDKQGRHIFG--------------------- 124
            ||.         :..|.|.:|......::.|..|...:..||.|                     
Zfish   150 DDLPRMGKASIRKPSLLEHAEMGHLELDQVDDYGRRWRHFHIGGQDYQVNMSVLEPYLQVLSHGG 214

  Fly   125 ----------IYASRF-PEKSQ------LEGFVREIIKEIEPFVENDYILVYFHQGLKEDNK-PS 171
                      ::.|.: ||.:.      ::...|.||..::..|..:|||||. .|:...|| |.
Zfish   215 YYGDGSTAIIMFTSCYLPENTTEHYEYVMDNLFRYIIGTLDLMVSENYILVYL-CGMAPRNKMPG 278

  Fly   172 AQFLWNSYKELDRNFRKNLKTLYVVHPTWFIRVIWNFFSPFISDKFRKKLVYISSLDELRQALGL 236
            .::|...|..:||..||:||.|:||||.|::|.:.....||||:||.:|:.:|.||.||.:.:.:
Zfish   279 IKWLRQCYMSIDRRLRKDLKGLFVVHPAWYVRALITVIKPFISEKFSRKMRFIHSLQELAEFVPV 343

  Fly   237 NKLKLPDNICDLDDKLN 253
            .:|::||.|.:.|.:||
Zfish   344 EQLQIPDCIREYDTQLN 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP68FNP_001401037.1 CRAL_TRIO_2 119..242 CDD:463965 47/161 (29%)
RhoGAP-p50rhoGAP 278..473 CDD:239869
bniplNP_001121866.1 BNIP2 79..219 CDD:463609 28/133 (21%)
CRAL_TRIO_2 223..356 CDD:463965 47/133 (35%)
Blue background indicates that the domain is not in the aligned region.

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