DRSC/TRiP Functional Genomics Resources

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Protein Alignment DEF8 and RUBCN

DIOPT Version :10

Sequence 1:NP_648549.1 Gene:DEF8 / 39381 FlyBaseID:FBgn0046296 Length:492 Species:Drosophila melanogaster
Sequence 2:XP_006713890.1 Gene:RUBCN / 9711 HGNCID:28991 Length:1012 Species:Homo sapiens


Alignment Length:387 Identity:106/387 - (27%)
Similarity:166/387 - (42%) Gaps:86/387 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 HSLSSDMVVMNAIRAVVG---------HHFVPHH----------------PHHGK-----RNRLQ 170
            ||.|::.|.|..::...|         ...||.|                |..|:     :.|::
Human   662 HSTSAEAVAMGLLKQFEGMQLPAASELEWLVPEHDAPQKLLPIPDSLPISPDDGQHADIYKLRIR 726

  Fly   171 AAAKRNYCDHCTTIIWSVVQNSYVCSDCGFLVHQKCIDGVKRVCAHVLVSERQHPISEICP--EI 233
            ......:......||::|                                   ||    .|  :|
Human   727 VRGNLEWAPPRPQIIFNV-----------------------------------HP----APTRKI 752

  Fly   234 GLASQGYKCAECGTMLN---IKNTWIEPRLCDYSGLYYCPRCNWNDSNFIPARIIHNWDFSPRRV 295
            .:|.|.|:||.||...:   ||..    |.|:|.|.|:|..|:.|....||:|::..||||...|
Human   753 AVAKQNYRCAGCGIRTDPDYIKRL----RYCEYLGKYFCQCCHENAQMAIPSRVLRKWDFSKYYV 813

  Fly   296 SRTALQEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVHMRHYLAACKIASELKLVDQQ 360
            |..:...:....|.||..:::.|..|:..|:.|..|:.||..|.||::....|::|.|  |:|..
Human   814 SNFSKDLLIKIWNDPLFNVQDINSALYRKVKLLNQVRLLRVQLCHMKNMFKTCRLAKE--LLDSF 876

  Fly   361 LGVRRHLAQSNEFYSLSDLSQVESGALSEFLQGVFKAFNDHIRSCPMCLAQAYICEICSN-NEVI 424
            ..|..||.:....|||:||:....|.|...|..:.:|...|:..|.:|.|:.:|||.|.| :::|
Human   877 DTVPGHLTEDLHLYSLNDLTATRKGELGPRLAELTRAGATHVERCMLCQAKGFICEFCQNEDDII 941

  Fly   425 FPFD-DGCIKCDQCNSIFHRVCLTRKNMICPKCIRIQERRLQLDR--MKSTEDDDDDDDGVA 483
            |||: ..|..|::|.:.:|:.|.  |:..||:|.|:|.||..|.|  ::|...|.:::...|
Human   942 FPFELHKCRTCEECKACYHKACF--KSGSCPRCERLQARREALARQSLESYLSDYEEEPAEA 1001

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DEF8NP_648549.1 C1_DEF8 <173..219 CDD:410369 3/45 (7%)
zf-RING_9 259..461 CDD:464030 70/203 (34%)
RUBCNXP_006713890.1 RUN_RUBCN 34..190 CDD:439048
Herpes_BLLF1 <197..462 CDD:282904
zf-RING_9 777..977 CDD:464030 70/203 (34%)
Blue background indicates that the domain is not in the aligned region.

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