DRSC/TRiP Functional Genomics Resources

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Protein Alignment DEF8 and plekhm1

DIOPT Version :10

Sequence 1:NP_648549.1 Gene:DEF8 / 39381 FlyBaseID:FBgn0046296 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001314780.1 Gene:plekhm1 / 564048 ZFINID:ZDB-GENE-030131-2752 Length:1058 Species:Danio rerio


Alignment Length:489 Identity:130/489 - (26%)
Similarity:215/489 - (43%) Gaps:77/489 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 WKDSLTSIPGTVAQLINESASNLLHASSTLGSTVGLGGSGSTGSGSEAGGSEESGPQGAEYRALP 68
            |.|.:|.....:..::.:....:||                |.|..|......|.|:.. ...||
Zfish   618 WVDRITEAVNKLRPIMRDEQWEVLH----------------TSSDQEVTSPAPSTPEHT-ISELP 665

  Fly    69 IPASLVREQWRLIFTSDANIQDLQAAIAHCRDLVLLSEELSEERRWLVRHLVDLRYSLQELEEAQ 133
            .|..|   .|..  ..|.....::.|:.:         :..||:.|  |.|| |..||:.|...|
Zfish   666 DPPQL---DWTR--HKDPEPDAIKEAVVY---------QSLEEKGW--RCLV-LSLSLEILRGFQ 713

  Fly   134 EQHSLSSDM--VVMNAIRAVVGHHFVPH----HPHHGK----RNRLQAAAK-----RNYCDHCTT 183
            .:....:.:  :.:.:||.|     ||.    .|...|    |:.|...|:     |.:    .:
Zfish   714 VREDSKTPLFSLPIGSIRDV-----VPDVSLGSPAFFKVLTVRDTLTLRAESGEEARGW----RS 769

  Fly   184 IIWSVVQNSYVCSDCGFLVHQKCIDGVKRVCAHVLVSER--------QHPISEICPEIGLASQGY 240
            :|...:.:.....|.|  ......||.:....|.||..|        .| :|.:..|.||.:|.|
Zfish   770 LIRGALDSYLETEDDG--AGASAADGAQGGVVHKLVQHRLKGDGELLLH-LSVVPIERGLDAQNY 831

  Fly   241 KCAECGTMLNIKNTWIEPRLCDYSGLYYCPRCNWNDSNFIPARIIHNWDFSPRRVSRTALQEIRL 305
            :||.|...:.:  :....|||::||..:|..|:..|.:.||:|::||||...|.|||.|.:.:..
Zfish   832 RCAGCSRQIGV--SLGRGRLCEFSGQQFCDSCHQGDMSIIPSRMLHNWDLKTREVSRQAFKLLTQ 894

  Fly   306 FLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVHMRHYLAACKIASELKLVDQQLGVRRHLAQS 370
            ..::||:.|...||:||...:.:..|:.|||.|..:..|:..|: :...|.:..:|..|.:|..:
Zfish   895 IEHEPLLNLAVLNPELFEHADIMAKVQNLRQRLRFLGDYVLLCR-SGFSKQIQPRLQQRTYLLDN 958

  Fly   371 NEFYSLSDLSQVESGALSEFLQGVFKAFNDHIRSCPMCLAQAYICEICSNNEVIFPFD-DGCIKC 434
            ::.||:.||.|:..|....:||.:.:..:.|:.:|.:|..:.:||:||:..::||||. |...:|
Zfish   959 SDVYSVLDLQQIADGHYESYLQSLIQFGSKHVHNCDLCTQRGFICQICNAPDIIFPFQFDVTSRC 1023

  Fly   435 DQCNSIFHRVCLTRKNMICPKCIRIQ---ERRLQ 465
            :.|.::||..| ..:..:||:|||.|   ||.|:
Zfish  1024 NVCKTVFHSSC-RAQCPVCPRCIRKQKYLERDLE 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DEF8NP_648549.1 C1_DEF8 <173..219 CDD:410369 8/50 (16%)
zf-RING_9 259..461 CDD:464030 69/205 (34%)
plekhm1NP_001314780.1 RUN_PLEKHM1 17..189 CDD:439041
PH-like 505..631 CDD:473070 3/12 (25%)
PH-like 684..767 CDD:473070 23/99 (23%)
zf-RING_9 848..1049 CDD:464030 68/202 (34%)
Blue background indicates that the domain is not in the aligned region.

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