DRSC/TRiP Functional Genomics Resources

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Protein Alignment DEF8 and Plekhm3

DIOPT Version :10

Sequence 1:NP_648549.1 Gene:DEF8 / 39381 FlyBaseID:FBgn0046296 Length:492 Species:Drosophila melanogaster
Sequence 2:NP_001418184.1 Gene:Plekhm3 / 316455 RGDID:1307151 Length:761 Species:Rattus norvegicus


Alignment Length:237 Identity:95/237 - (40%)
Similarity:146/237 - (61%) Gaps:12/237 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 EIGLASQGYKCAECGTMLNIKNTWIEPRLCDYSGLYYCPRCNWNDSNFIPARIIHNWDFSPRRVS 296
            |.||.:|.:|||.|...:.:.|.  :.::|:|||.|||..|:.:||..|||||:||||.|..:||
  Rat   504 ERGLTAQSFKCAGCQRPIGLSNG--KAKVCNYSGWYYCSSCHVDDSFLIPARIVHNWDTSKYKVS 566

  Fly   297 RTALQEIRLFLNKPLIRLEEDNPKLFVFVEKLCAVKKLRQNLVHMRHYLAACK--IASELKLVDQ 359
            :.|.:.:.....:|||.::::||.|::..|.|..|.:|||.|..:|.||.:|:  :|.:|:   :
  Rat   567 KQAKEFLEYVYEEPLIDIQQENPMLYLHAEPLATVARLRQRLKSLRAYLFSCRAAVAEDLR---R 628

  Fly   360 QLGVRRHLAQSNEFYSLSDLSQVESGALSEFLQGVFKAFNDHIRSCPMCLAQAYICEICSNNEVI 424
            ::..|.:|.|....|||:||.||..|.|:.||..|.|....|:.||.:|..:.:|||||:|.|::
  Rat   629 RIFPREYLLQQIHLYSLADLQQVIEGKLAPFLGKVIKFATAHVYSCSLCSQKGFICEICNNGEIL 693

  Fly   425 FPFDD-GCIKCDQCNSIFHRVCLTRKNMICPKCIRIQERRLQ 465
            :||:| ...:|:.|.|:||..| ..|::.||:|:|   |.||
  Rat   694 YPFEDISTSRCESCGSVFHSEC-KEKSVPCPRCVR---RELQ 731

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DEF8NP_648549.1 C1_DEF8 <173..219 CDD:410369
zf-RING_9 259..461 CDD:464030 83/204 (41%)
Plekhm3NP_001418184.1 PH_PLEKHM3_1 215..304 CDD:270193
PH-like 364..451 CDD:473070
zf-RING_9 529..729 CDD:464030 83/206 (40%)
Blue background indicates that the domain is not in the aligned region.

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